RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 FBXL16Q8N461 479 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
CDH1-212ENST00000611625 KRT19P08727 400 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
CDH1-212ENST00000611625 RASSF2P50749 326 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 STK4Q13043 487 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 SGO2Q562F6 1265 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 TACO1Q9BSH4 297 aaKnown RBP13.48□□□□□ -0.25
CDH1-212ENST00000611625 ZNF148Q9UQR1 794 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.48□□□□□ -0.25
CDH1-212ENST00000611625 SFI1A8K8P3 1242 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 NOP56O00567 594 aaKnown RBP13.48□□□□□ -0.25
CDH1-212ENST00000611625 TROVE2P10155 538 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDH1-212ENST00000611625 STAT2P52630 851 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 BPIFB4P59827 614 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 CFAP157Q5JU67 520 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 ZNF185O15231 689 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 MAPK4P31152 587 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 SLCO1A2P46721 670 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 TROAPQ12815 778 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 CC2D2BQ6DHV5 1058 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
CDH1-212ENST00000611625 NOA1Q8NC60 698 aaKnown RBP13.48□□□□□ -0.25
CDH1-212ENST00000611625 AZI2Q9H6S1 392 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 VIPAS39Q9H9C1 493 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 LGSNQ5TDP6 509 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 VPS52Q8N1B4 723 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 GIMAP8Q8ND71 665 aaPredicted RBP13.48□□□□□ -0.25
CDH1-212ENST00000611625 DNAJC12Q9UKB3 198 aa13.48□□□□□ -0.25
CDH1-212ENST00000611625 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
CDH1-212ENST00000611625 NTRK3Q16288 839 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 CCDC14Q49A88 953 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 RSAD2Q8WXG1 361 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 C7orf25Q9BPX7 421 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 ZMYND12Q9H0C1 365 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 GJA3Q9Y6H8 435 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 PLEKHG2Q9H7P9 1386 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
CDH1-212ENST00000611625 CAMTA2O94983 1202 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 SNAP25P60880 206 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
CDH1-212ENST00000611625 RHOT2Q8IXI1 618 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 NIM1KQ8IY84 436 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 LRRC1Q9BTT6 524 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 MEGF6O75095 1541 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 GRID2IPA4D2P6 1211 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 SNX1Q13596 522 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 PALM2Q8IXS6 379 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 ARHGAP24Q8N264 748 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 SLC17A8Q8NDX2 589 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 PIGOQ8TEQ8 1089 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 PACSIN2Q9UNF0 486 aaPredicted RBP13.47□□□□□ -0.25
CDH1-212ENST00000611625 SALL1Q9NSC2 1324 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 I3L4J1 428 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 PSMD14O00487 310 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 PHBP35232 272 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 KNOP1Q1ED39 458 aaKnown RBP13.47□□□□□ -0.25
CDH1-212ENST00000611625 NAALADL2Q58DX5 795 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 CTAGE3PQ8IX95 158 aa13.47□□□□□ -0.25
CDH1-212ENST00000611625 ACTR5Q9H9F9 607 aaPredicted RBP13.47□□□□□ -0.25
CDH1-212ENST00000611625 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 RASGRF2O14827 1237 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
CDH1-212ENST00000611625 PLA2G4AP47712 749 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 YWHAEP62258 255 aaKnown RBP13.46□□□□□ -0.25
CDH1-212ENST00000611625 BFSP1Q12934 665 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 ZKSCAN8Q15776 578 aaPredicted RBP13.46□□□□□ -0.25
CDH1-212ENST00000611625 DCAF4Q8WV16 495 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 HIP1RO75146 1068 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 ITIH3Q06033 890 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 KAZNQ674X7 775 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 TMEM179Q6ZVK1 233 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 TRIM11Q96F44 468 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 DDX47Q9H0S4 455 aaKnown RBP13.46□□□□□ -0.25
CDH1-212ENST00000611625 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 PDS5AQ29RF7 1337 aaKnown RBP13.46□□□□□ -0.25
CDH1-212ENST00000611625 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.25
CDH1-212ENST00000611625 RAB3IPQ96QF0 476 aaPredicted RBP13.46□□□□□ -0.25
CDH1-212ENST00000611625 STK32BQ9NY57 414 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 FHOD1Q9Y613 1164 aa13.46□□□□□ -0.25
CDH1-212ENST00000611625 PDIA5Q14554 519 aa13.46□□□□□ -0.26
CDH1-212ENST00000611625 FAM20AQ96MK3 541 aa13.46□□□□□ -0.26
CDH1-212ENST00000611625 EFCC1Q9HA90 598 aa13.46□□□□□ -0.26
CDH1-212ENST00000611625 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 NTSR2O95665 410 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
CDH1-212ENST00000611625 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms