RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 KLRC4O43908 158 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 SNUPNO95149 360 aaKnown RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 PECAM1P16284 738 aaPredicted RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 KCNA1Q09470 495 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 IL17AQ16552 155 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 ASTE1Q2TB18 679 aaPredicted RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 ERMARDQ5T6L9 678 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 INPP4AQ96PE3 977 aaPredicted RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 NOVA2Q9UNW9 492 aaKnown RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 TNRC6CQ9HCJ0 1690 aaKnown RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 EME2A4GXA9 379 aaPredicted RBP13.06□□□□□ -0.32
TP53-220ENST00000610623 RBAK-RBAKDNI3L0D1 243 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 CLTAP09496 248 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 CCND1P24385 295 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 ECHS1P30084 290 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 GYG1P46976 350 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 ARHGAP27Q6ZUM4 889 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
TP53-220ENST00000610623 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 LUC7L3O95232 432 aaKnown RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 PRPHP41219 470 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 RASSF7Q02833 373 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 TRADDQ15628 312 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 MEI1Q5TIA1 1274 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 XPO6Q96QU8 1125 aaKnown RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 EDEM3Q9BZQ6 932 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 CPSF2Q9P2I0 782 aaKnown RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 SIK3Q9Y2K2 1263 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 AFF2P51816 1311 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 GOLGA6L10A0A0M3HER8 536 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 BHMG1C9JSJ3 638 aaPredicted RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 BUB1O43683 1085 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 RFC4P35249 363 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 PEX19P40855 299 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 FUT2Q10981 343 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 TRAF1Q13077 416 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 RRP12Q5JTH9 1297 aaKnown RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 PIGWQ7Z7B1 504 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 MAGOHBQ96A72 148 aaKnown RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 ANKRD27Q96NW4 1050 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 PSMD1Q99460 953 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
TP53-220ENST00000610623 NPDC1Q9NQX5 325 aaPredicted RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 TRPC5Q9UL62 973 aaPredicted RBP13.05□□□□□ -0.32
TP53-220ENST00000610623 EIF3BP55884 814 aaKnown RBP13.04□□□□□ -0.32
TP53-220ENST00000610623 BLMHQ13867 455 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 NPY5RQ15761 445 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 ANKRD40Q6AI12 368 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 ANKRD13CQ8N6S4 541 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
TP53-220ENST00000610623 ZNF570Q96NI8 536 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 ZNF317Q96PQ6 595 aaPredicted RBP13.04□□□□□ -0.32
TP53-220ENST00000610623 KBTBD4Q9NVX7 518 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 PCDHGC5Q9Y5F6 944 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 PRKAB2O43741 272 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 AHCYL1O43865 530 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 PALMO75781 387 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 FESP07332 822 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 NAB2Q15742 525 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 VWA3BQ502W6 1294 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 SPDYCQ5MJ68 293 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 AGAP11Q8TF27 550 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 TLCD1Q96CP7 247 aa13.04□□□□□ -0.32
TP53-220ENST00000610623 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
TP53-220ENST00000610623 ABCB11O95342 1321 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 LAMB1P07942 1786 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
TP53-220ENST00000610623 PRDM1O75626 825 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
TP53-220ENST00000610623 HIBADHP31937 336 aaKnown RBP13.03□□□□□ -0.32
TP53-220ENST00000610623 MCM7P33993 719 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 SLC1A4P43007 532 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 CCNG1P51959 295 aa13.03□□□□□ -0.32
TP53-220ENST00000610623 SEPT2Q15019 361 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms