RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 PCDHA12Q9UN75 941 aa16.9■□□□□ 0.3
CSNK2A1-209ENST00000609606 SAMM50Q9Y512 469 aa16.9■□□□□ 0.3
CSNK2A1-209ENST00000609606 PCDHB6Q9Y5E3 794 aa16.9■□□□□ 0.3
CSNK2A1-209ENST00000609606 LAD1O00515 517 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 BACH1O14867 736 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 CLTBP09497 229 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 OR52Z1P0C646 297 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 FAAP100Q0VG06 881 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 RESTQ13127 1097 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 FAM47CQ5HY64 1035 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 SWSAP1Q6NVH7 229 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 MIER3Q7Z3K6 550 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 FERMT3Q86UX7 667 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 CCDC60Q8IWA6 550 aaPredicted RBP16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 TNPO1Q92973 898 aaKnown RBP16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 TTC12Q9H892 705 aaPredicted RBP16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 ZNF302Q9NR11 478 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 HDAC6Q9UBN7 1215 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 MAFBQ9Y5Q3 323 aaPredicted RBP16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 MYH15Q9Y2K3 1946 aa16.89■□□□□ 0.29
CSNK2A1-209ENST00000609606 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 CHMP2AO43633 222 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 B4GALT4O60513 344 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 SMIM10L2AP0DMW4 78 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 SMIM10L2BP0DMW5 78 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 CHMP4BP1P59074 171 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 NBR1Q14596 966 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 PDXDC2PQ6P474 469 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 RNPEPQ9H4A4 650 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 PDLIM7Q9NR12 457 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 TBX21Q9UL17 535 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 IGSF9BQ9UPX0 1349 aa16.88■□□□□ 0.29
CSNK2A1-209ENST00000609606 EML1O00423 815 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 BMP15O95972 392 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 GNAT1P11488 350 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 PRPHP41219 470 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 TXKP42681 527 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 PTGDRQ13258 359 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 TRPV6Q9H1D0 765 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 TRMT13Q9NUP7 481 aaKnown RBP16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 GABBR1Q9UBS5 961 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 NRCAMQ92823 1304 aa16.87■□□□□ 0.29
CSNK2A1-209ENST00000609606 LTBP2Q14767 1821 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 POTEB3A0JP26 581 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 HBP1O60381 514 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 MARK3P27448 753 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 ADAM17P78536 824 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 ATP2C1P98194 919 aaPredicted RBP16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 MKRN4PQ13434 485 aaPredicted RBP16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 PLCB4Q15147 1175 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 EPHA7Q15375 998 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 PTGISQ16647 500 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 POTEBQ6S5H4 581 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 ATP8B4Q8TF62 1192 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 PPP1R13LQ8WUF5 828 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 ATP6V0A1Q93050 837 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 FAM167AQ96KS9 214 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 TMEM39AQ9NV64 488 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 PRKAG2Q9UGJ0 569 aa16.86■□□□□ 0.29
CSNK2A1-209ENST00000609606 C17orf102A2RUQ5 167 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 RRN3P2A6NIE6 340 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 P4HBP07237 508 aaKnown RBP16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 ZSCAN22P10073 491 aaPredicted RBP16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 ATP4AP20648 1035 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.292e-10■■□□□ 12.3
CSNK2A1-209ENST00000609606 PPFIA1Q13136 1202 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 NEK9Q8TD19 979 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 LMBR1Q8WVP7 490 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 BBXQ8WY36 941 aaPredicted RBP16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 COL1A2P08123 1366 aa16.85■□□□□ 0.29
CSNK2A1-209ENST00000609606 MBLAC1A4D2B0 266 aaPredicted RBP16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 TRIM43BA6NCK2 446 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 H0YGN5 161 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 ZNF862O60290 1169 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 DKC1O60832 514 aaKnown RBP eCLIP16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 INSRRP14616 1297 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 PSMC5P62195 406 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 PRKCEQ02156 737 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 PTK7Q13308 1070 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 HIC1Q14526 733 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 PDIA5Q14554 519 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 GRIK4Q16099 956 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 UGCGQ16739 394 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 TMEM266Q2M3C6 531 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 NCAPH2Q6IBW4 605 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 SH3RF1Q7Z6J0 888 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 SERINC5Q86VE9 423 aa16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 TRIM43Q96BQ3 446 aaPredicted RBP16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 PRDM5Q9NQX1 630 aaPredicted RBP16.84■□□□□ 0.29
CSNK2A1-209ENST00000609606 SETD4Q9NVD3 440 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms