RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 NDUFV1P49821 464 aa16.47■□□□□ 0.23
LINC01278-203ENST00000608788 VCPP55072 806 aaKnown RBP16.47■□□□□ 0.23
LINC01278-203ENST00000608788 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
LINC01278-203ENST00000608788 SLC35G1Q2M3R5 365 aa16.47■□□□□ 0.23
LINC01278-203ENST00000608788 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
LINC01278-203ENST00000608788 SUGP1Q8IWZ8 645 aaKnown RBP16.47■□□□□ 0.23
LINC01278-203ENST00000608788 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
LINC01278-203ENST00000608788 SPPL3Q8TCT6 385 aa16.47■□□□□ 0.23
LINC01278-203ENST00000608788 LINC01599Q8WXQ3 324 aa16.47■□□□□ 0.23
LINC01278-203ENST00000608788 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
LINC01278-203ENST00000608788 DMXL1Q9Y485 3027 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 PLXNA3P51805 1871 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 DOCK5Q9H7D0 1870 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 ZBTB5O15062 677 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 GFRA3O60609 400 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 ITGB1P05556 798 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 PDE1AP54750 535 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 SIGLEC14Q08ET2 396 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
LINC01278-203ENST00000608788 NAALADL2Q58DX5 795 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 RUFY4Q6ZNE9 571 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 FAM86C1Q9NVL1 165 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 USP15Q9Y4E8 981 aaPredicted RBP16.46■□□□□ 0.23
LINC01278-203ENST00000608788 PCDHA1Q9Y5I3 950 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
LINC01278-203ENST00000608788 DNAH14Q0VDD8 3507 aa16.46■□□□□ 0.23
LINC01278-203ENST00000608788 NRCAMQ92823 1304 aa16.45■□□□□ 0.22
LINC01278-203ENST00000608788 FRYLO94915 3013 aa16.45■□□□□ 0.22
LINC01278-203ENST00000608788 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
LINC01278-203ENST00000608788 ARHGAP4P98171 946 aa16.45■□□□□ 0.22
LINC01278-203ENST00000608788 FOXK2Q01167 660 aa16.45■□□□□ 0.22
LINC01278-203ENST00000608788 FBXO47Q5MNV8 452 aa16.45■□□□□ 0.22
LINC01278-203ENST00000608788 SUSD6Q92537 303 aa16.45■□□□□ 0.22
LINC01278-203ENST00000608788 PHF7Q9BWX1 381 aaPredicted RBP16.45■□□□□ 0.22
LINC01278-203ENST00000608788 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
LINC01278-203ENST00000608788 B4E1Z4 1266 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 PROB1E7EW31 1015 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 NOP56O00567 594 aaKnown RBP16.44■□□□□ 0.22
LINC01278-203ENST00000608788 ZNF213O14771 459 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 CSPG5O95196 566 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 NEDD9Q14511 834 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 TAF2Q6P1X5 1199 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 CYFIP1Q7L576 1253 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 RTN4RL1Q86UN2 441 aaPredicted RBP16.44■□□□□ 0.22
LINC01278-203ENST00000608788 CMTR2Q8IYT2 770 aaKnown RBP16.44■□□□□ 0.22
LINC01278-203ENST00000608788 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
LINC01278-203ENST00000608788 BARX2Q9UMQ3 279 aaPredicted RBP16.44■□□□□ 0.22
LINC01278-203ENST00000608788 BAZ2BQ9UIF8 2168 aaKnown RBP16.43■□□□□ 0.22
LINC01278-203ENST00000608788 MBLAC1A4D2B0 266 aaPredicted RBP16.43■□□□□ 0.22
LINC01278-203ENST00000608788 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
LINC01278-203ENST00000608788 STAM2O75886 525 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 AVPR2P30518 371 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 GNPTABQ3T906 1256 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 KLHL23Q8NBE8 558 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 ATP8B4Q8TF62 1192 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 PPP2R3CQ969Q6 453 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 AGO3Q9H9G7 860 aaKnown RBP16.43■□□□□ 0.22
LINC01278-203ENST00000608788 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
LINC01278-203ENST00000608788 KAT6AQ92794 2004 aa16.43■□□□□ 0.22
LINC01278-203ENST00000608788 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
LINC01278-203ENST00000608788 TRIM6-TRIM34B2RNG4 842 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 FIBPO43427 364 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 ATF7P17544 494 aaPredicted RBP16.42■□□□□ 0.22
LINC01278-203ENST00000608788 NRIP1P48552 1158 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 SEC23AQ15436 765 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 MARCH8Q5T0T0 291 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 TSHZ1Q6ZSZ6 1077 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 FCHSD1Q86WN1 690 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 VN1R2Q8NFZ6 395 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 POF1BQ8WVV4 589 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 SENP7Q9BQF6 1050 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 RIOX1Q9H6W3 641 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 PCDHGC5Q9Y5F6 944 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 PLXNA4Q9HCM2 1894 aa16.42■□□□□ 0.22
LINC01278-203ENST00000608788 NPAS4Q8IUM7 802 aa16.41■□□□□ 0.22
LINC01278-203ENST00000608788 IRF2BPLQ9H1B7 796 aa16.41■□□□□ 0.22
LINC01278-203ENST00000608788 CYTH3O43739 400 aa16.4■□□□□ 0.22
LINC01278-203ENST00000608788 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
LINC01278-203ENST00000608788 PTPN21Q16825 1174 aa16.4■□□□□ 0.22
LINC01278-203ENST00000608788 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
LINC01278-203ENST00000608788 ANKRD45Q5TZF3 282 aa16.4■□□□□ 0.22
LINC01278-203ENST00000608788 RBM23Q86U06 439 aaKnown RBP16.4■□□□□ 0.22
LINC01278-203ENST00000608788 RPGRIP1Q96KN7 1286 aa16.4■□□□□ 0.22
LINC01278-203ENST00000608788 CDY2AQ9Y6F7 541 aa16.4■□□□□ 0.22
LINC01278-203ENST00000608788 SQORQ9Y6N5 450 aa16.4■□□□□ 0.22
LINC01278-203ENST00000608788 EP300Q09472 2414 aaPredicted RBP16.4■□□□□ 0.22
LINC01278-203ENST00000608788 SDSP20132 328 aa16.39■□□□□ 0.21
LINC01278-203ENST00000608788 CD52P31358 61 aa16.39■□□□□ 0.21
LINC01278-203ENST00000608788 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
LINC01278-203ENST00000608788 KCNC3Q14003 757 aa16.39■□□□□ 0.21
LINC01278-203ENST00000608788 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
LINC01278-203ENST00000608788 DNAJB3Q8WWF6 145 aa16.39■□□□□ 0.21
LINC01278-203ENST00000608788 ATOH1Q92858 354 aaPredicted RBP16.39■□□□□ 0.21
LINC01278-203ENST00000608788 PIGSQ96S52 555 aa16.39■□□□□ 0.21
LINC01278-203ENST00000608788 RTEL1Q9NZ71 1219 aa16.39■□□□□ 0.21
LINC01278-203ENST00000608788 TUBE1Q9UJT0 475 aa16.39■□□□□ 0.21
LINC01278-203ENST00000608788 EPG5Q9HCE0 2579 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms