RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 MGARPQ8TDB4 240 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 CENPTQ96BT3 561 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 CLMNQ96JQ2 1002 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 NSRP1Q9H0G5 558 aaKnown RBP13.67□□□□□ -0.22
CTCFL-218ENST00000608440 FGFR1OP2Q9NVK5 253 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 NMRK1Q9NWW6 199 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 GMEB1Q9Y692 573 aa13.67□□□□□ -0.22
CTCFL-218ENST00000608440 A0A0G2JS52 829 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 NVLO15381 856 aaKnown RBP13.66□□□□□ -0.22
CTCFL-218ENST00000608440 NKX1-1Q15270 411 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-218ENST00000608440 KIAA0753Q2KHM9 967 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTCFL-218ENST00000608440 RBBP8NLQ8NC74 664 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-218ENST00000608440 SPIRE2Q8WWL2 714 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 THAP9Q9H5L6 903 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-218ENST00000608440 BARX2Q9UMQ3 279 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-218ENST00000608440 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 LGALS16A8MUM7 142 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 ENTPD5O75356 428 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-218ENST00000608440 MICU3Q86XE3 530 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 TMEM237Q96Q45 408 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 GSDMAQ96QA5 445 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 TMEM98Q9Y2Y6 226 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 C5P01031 1676 aa13.66□□□□□ -0.22
CTCFL-218ENST00000608440 NRAPQ86VF7 1730 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 AKR1B10O60218 316 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 CEP104O60308 925 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 WFS1O76024 890 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 TMED1Q13445 227 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 NCCRP1Q6ZVX7 275 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 IRF2BP1Q8IU81 584 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 NOSTRINQ8IVI9 506 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 SLF2Q8IX21 1173 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 RAB3IPQ96QF0 476 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 DSCC1Q9BVC3 393 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 RWDD2AQ9UIY3 292 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 WDR37Q9Y2I8 494 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 ATP8A1Q9Y2Q0 1164 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 GDAQ9Y2T3 454 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 ERVV-2B6SEH9 535 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 METAP2P50579 478 aaKnown RBP eCLIP13.65□□□□□ -0.223e-6■□□□□ 9.1
CTCFL-218ENST00000608440 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 PTPROQ16827 1216 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 CCDC92Q53HC0 331 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 DUS1LQ6P1R4 473 aaKnown RBP13.65□□□□□ -0.22
CTCFL-218ENST00000608440 SESTD1Q86VW0 696 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 SMYD1Q8NB12 490 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 LPIN2Q92539 896 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 TLCD1Q96CP7 247 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 DBNDD2Q9BQY9 259 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 SPATA16Q9BXB7 569 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 ADAM7Q9H2U9 754 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 RMND1Q9NWS8 449 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 CTTNBP2NLQ9P2B4 639 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 LAMA4Q16363 1823 aa13.65□□□□□ -0.22
CTCFL-218ENST00000608440 N4BP2Q86UW6 1770 aaPredicted RBP13.65□□□□□ -0.23
CTCFL-218ENST00000608440 DAPK3O43293 454 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
CTCFL-218ENST00000608440 SUN1O94901 812 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 MAGEA1P43355 309 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 KIF11P52732 1056 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 AZIN2Q96A70 460 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF333Q96JL9 665 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 RMDN2Q96LZ7 410 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 MYL10Q9BUA6 226 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 TBC1D7Q9P0N9 293 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 LRCH1Q9Y2L9 728 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 PALLDQ8WX93 1383 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 TCP11X1B4DZS4 312 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 E7ENQ6 273 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 F8VZ95 297 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 TJP3O95049 919 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
CTCFL-218ENST00000608440 PDE6CP51160 858 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 ANTXR2P58335 489 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 TNNC1P63316 161 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 EHHADHQ08426 723 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 NR5A1Q13285 461 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 CCDC6Q16204 474 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 SAPCD2Q86UD0 394 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 FAM13CQ8NE31 585 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 UHMK1Q8TAS1 419 aaKnown RBP13.64□□□□□ -0.23
CTCFL-218ENST00000608440 TIPINQ9BVW5 301 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms