RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 LYPLA2O95372 231 aa23.99■■□□□ 1.43
USP6NL-204ENST00000606752 TPM3P06753 285 aa23.99■■□□□ 1.43
USP6NL-204ENST00000606752 PMS1P54277 932 aaKnown RBP23.99■■□□□ 1.43
USP6NL-204ENST00000606752 RAD51AP2Q09MP3 1159 aa23.99■■□□□ 1.43
USP6NL-204ENST00000606752 HERC4Q5GLZ8 1057 aaPredicted RBP23.99■■□□□ 1.43
USP6NL-204ENST00000606752 P2RX5Q93086 422 aa23.99■■□□□ 1.43
USP6NL-204ENST00000606752 CACNB1Q02641 598 aaPredicted RBP23.98■■□□□ 1.43
USP6NL-204ENST00000606752 WDR78Q5VTH9 848 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 TTI2Q6NXR4 508 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 C1orf186Q6ZWK4 172 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 NAP1L5Q96NT1 182 aaPredicted RBP23.98■■□□□ 1.43
USP6NL-204ENST00000606752 MPHOSPH6Q99547 160 aaKnown RBP23.98■■□□□ 1.43
USP6NL-204ENST00000606752 PTPN18Q99952 460 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 REEP2Q9BRK0 252 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 RUSC1Q9BVN2 902 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 PORCNQ9H237 461 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 PCDHA10Q9Y5I2 948 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 LCTP09848 1927 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 TRIM49BA6NDI0 452 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 PGK2P07205 417 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 SMAP1Q8IYB5 467 aaPredicted RBP23.98■■□□□ 1.43
USP6NL-204ENST00000606752 ANKRD13CQ8N6S4 541 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 KCND2Q9NZV8 630 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 MORF4L1Q9UBU8 362 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 PCDHA2Q9Y5H9 948 aa23.98■■□□□ 1.43
USP6NL-204ENST00000606752 PSMC5P62195 406 aa23.97■■□□□ 1.43
USP6NL-204ENST00000606752 CENPPQ6IPU0 288 aa23.97■■□□□ 1.43
USP6NL-204ENST00000606752 C4orf19Q8IY42 314 aa23.97■■□□□ 1.43
USP6NL-204ENST00000606752 PARK7Q99497 189 aaKnown RBP23.97■■□□□ 1.43
USP6NL-204ENST00000606752 EFCC1Q9HA90 598 aa23.97■■□□□ 1.43
USP6NL-204ENST00000606752 JPH1Q9HDC5 661 aaPredicted RBP23.97■■□□□ 1.43
USP6NL-204ENST00000606752 ZNF157P51786 506 aaPredicted RBP23.96■■□□□ 1.43
USP6NL-204ENST00000606752 SPAG1Q07617 926 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 SEPT14Q6ZU15 432 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 NOC3LQ8WTT2 800 aaKnown RBP23.96■■□□□ 1.43
USP6NL-204ENST00000606752 TRIM47Q96LD4 638 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 CTAGE1Q96RT6 745 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 ZHX3Q9H4I2 956 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 SLC9A2Q9UBY0 812 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 NRBP1Q9UHY1 535 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 ARHGEF35A5YM69 484 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 ANKRD40Q6AI12 368 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 MYOCDQ8IZQ8 938 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 FGD4Q96M96 766 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 DUSP9Q99956 384 aaKnown RBP23.96■■□□□ 1.43
USP6NL-204ENST00000606752 THAP9Q9H5L6 903 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 DBR1Q9UK59 544 aaKnown RBP23.96■■□□□ 1.43
USP6NL-204ENST00000606752 COL4A3BPQ9Y5P4 624 aa23.96■■□□□ 1.43
USP6NL-204ENST00000606752 TBCAO75347 108 aaKnown RBP23.95■■□□□ 1.42
USP6NL-204ENST00000606752 CCDC186Q7Z3E2 898 aa23.95■■□□□ 1.42
USP6NL-204ENST00000606752 ZSCAN30Q86W11 494 aa23.95■■□□□ 1.42
USP6NL-204ENST00000606752 SEMA6BQ9H3T3 888 aa23.95■■□□□ 1.42
USP6NL-204ENST00000606752 BCAS3Q9H6U6 928 aa23.95■■□□□ 1.42
USP6NL-204ENST00000606752 TBC1D7Q9P0N9 293 aa23.95■■□□□ 1.42
USP6NL-204ENST00000606752 LOC102724159A0A0B4J2E5 919 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 LRRC10BA6NIK2 292 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 SP2Q02086 613 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 PWP2Q15269 919 aaKnown RBP23.94■■□□□ 1.42
USP6NL-204ENST00000606752 LRRC41Q15345 812 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 APTXQ7Z2E3 356 aaKnown RBP23.94■■□□□ 1.42
USP6NL-204ENST00000606752 SAPCD2Q86UD0 394 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 RASAL3Q86YV0 1011 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 CSGALNACT2Q8N6G5 542 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 GLIS3Q8NEA6 775 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 SRRTQ9BXP5 876 aaKnown RBP23.94■■□□□ 1.42
USP6NL-204ENST00000606752 IMPACTQ9P2X3 320 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 ESPNB1AK53 854 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 KIF20AO95235 890 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 PSAPP07602 524 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 TGFB3P10600 412 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 GAP43P17677 238 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 UGCGQ16739 394 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 FOXR2Q6PJQ5 311 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 ANKRD20A12PQ8NF67 263 aa23.94■■□□□ 1.42
USP6NL-204ENST00000606752 LIMA1Q9UHB6 759 aaKnown RBP23.94■■□□□ 1.42
USP6NL-204ENST00000606752 TRPM7Q96QT4 1865 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 A0A1B0GTH6 734 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 GUCY2CP25092 1073 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 YWHABP31946 246 aaKnown RBP23.93■■□□□ 1.42
USP6NL-204ENST00000606752 ACTR2P61160 394 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 CCDC144BQ3MJ40 725 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 TCP11X2Q5H9J9 407 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 SFR1Q86XK3 245 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 IRF2BP1Q8IU81 584 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 INTS13Q9NVM9 706 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 ODF2LQ9ULJ1 636 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 ZKSCAN5Q9Y2L8 839 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 PASKQ96RG2 1323 aa23.93■■□□□ 1.42
USP6NL-204ENST00000606752 KIAA1217Q5T5P2 1943 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 MANSC4A6NHS7 340 aaPredicted RBP23.92■■□□□ 1.42
USP6NL-204ENST00000606752 RSPH10B2B2RC85 870 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 KCNJ18B7U540 433 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 STRNO43815 780 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 DKC1O60832 514 aaKnown RBP eCLIP23.92■■□□□ 1.42
USP6NL-204ENST00000606752 RSPH10BP0C881 870 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 PTGS1P23219 599 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 RARRES1P49788 294 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 LRRC63Q05C16 580 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 KCNJ12Q14500 433 aa23.92■■□□□ 1.42
USP6NL-204ENST00000606752 NR1I3Q14994 352 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms