RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 RSPH10BP0C881 870 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 WDR5P61964 334 aaKnown RBP13.98□□□□□ -0.17
CTSA-210ENST00000606000 ST3GAL1Q11201 340 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 ME3Q16798 604 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 PRR16Q569H4 304 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 MARCH8Q5T0T0 291 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 NIPA1Q7RTP0 329 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 GJA10Q969M2 543 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 ZNF577Q9BSK1 485 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 SMARCAD1Q9H4L7 1026 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 PCDHA4Q9UN74 947 aa13.98□□□□□ -0.17
CTSA-210ENST00000606000 COL4A4P53420 1690 aaPredicted RBP13.98□□□□□ -0.17
CTSA-210ENST00000606000 NRCAMQ92823 1304 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 MICAL3Q7RTP6 2002 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 IPO5O00410 1097 aaKnown RBP13.97□□□□□ -0.17
CTSA-210ENST00000606000 TDP2O95551 362 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 PLCB4Q15147 1175 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 RAB30Q15771 203 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 CPLX2Q6PUV4 134 aaKnown RBP13.97□□□□□ -0.17
CTSA-210ENST00000606000 SPRED2Q7Z698 418 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 CCDC60Q8IWA6 550 aaPredicted RBP13.97□□□□□ -0.17
CTSA-210ENST00000606000 BLIDQ8IZY5 108 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 BICD2Q8TD16 824 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 TBCKQ8TEA7 893 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 SLC9A7Q96T83 725 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 PRDM12Q9H4Q4 367 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 MSRAQ9UJ68 235 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 TUBE1Q9UJT0 475 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 WDR81Q562E7 1941 aa13.97□□□□□ -0.17
CTSA-210ENST00000606000 CDH23Q9H251 3354 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 STK36Q9NRP7 1315 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 IGKV6D-21A0A0A0MT36 114 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 BAIAP3O94812 1187 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 ATG7O95352 703 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 CA3P07451 260 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 GNAT1P11488 350 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 INSRRP14616 1297 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 FOSL2P15408 326 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 CIITAP33076 1130 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 STAT5BP51692 787 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 NEK4P51957 841 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
CTSA-210ENST00000606000 MCTP2Q6DN12 878 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 ABHD15Q6UXT9 468 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.96□□□□□ -0.172e-16■■■■□ 24.7
CTSA-210ENST00000606000 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 DBF4BQ8NFT6 615 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 AZI2Q9H6S1 392 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 KAT6AQ92794 2004 aa13.96□□□□□ -0.17
CTSA-210ENST00000606000 LCHNA4D1U4 455 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 MBLAC1A4D2B0 266 aaPredicted RBP13.95□□□□□ -0.18
CTSA-210ENST00000606000 BACH1O14867 736 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 MSH4O15457 936 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 JAK2O60674 1132 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 CDKL5O76039 1030 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 CHRNA1P02708 482 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 FDPSP14324 419 aaKnown RBP13.95□□□□□ -0.18
CTSA-210ENST00000606000 ATP4AP20648 1035 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 KCNJ6P48051 423 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 FOSBP53539 338 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 MGAT3Q09327 533 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
CTSA-210ENST00000606000 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 PPP2R2DQ66LE6 453 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 DNAJB3Q8WWF6 145 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 GTF3C6Q969F1 213 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 FAM49AQ9H0Q0 323 aaPredicted RBP13.95□□□□□ -0.18
CTSA-210ENST00000606000 CERS4Q9HA82 394 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 PCDHA11Q9Y5I1 949 aa13.95□□□□□ -0.18
CTSA-210ENST00000606000 FAM205CA6NFA0 338 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 PARNO95453 639 aaKnown RBP13.94□□□□□ -0.18
CTSA-210ENST00000606000 TMEM62Q0P6H9 643 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 ADGRE1Q14246 886 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 INF2Q27J81 1249 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 PLEKHG4Q58EX7 1191 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 EARS2Q5JPH6 523 aaKnown RBP13.94□□□□□ -0.18
CTSA-210ENST00000606000 FAM26DQ5JW98 314 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 SWSAP1Q6NVH7 229 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 FAM117BQ6P1L5 589 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 PLPPR4Q7Z2D5 763 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 TRMT1LQ7Z2T5 733 aaKnown RBP13.94□□□□□ -0.18
CTSA-210ENST00000606000 MAFAQ8NHW3 353 aaPredicted RBP13.94□□□□□ -0.18
CTSA-210ENST00000606000 KIF2CQ99661 725 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 ZNF302Q9NR11 478 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 ORC3Q9UBD5 711 aaPredicted RBP13.94□□□□□ -0.18
CTSA-210ENST00000606000 LOXHD1Q8IVV2 1947 aa13.94□□□□□ -0.18
CTSA-210ENST00000606000 ABHD14A-ACY1A0A1B0GW23 586 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 POTEB3A0JP26 581 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 RFXAPO00287 272 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 CHMP2AO43633 222 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 SLC37A4O43826 429 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 CAND2O75155 1236 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 GHRP10912 638 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms