RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 WDR5P61964 334 aaKnown RBP12.15□□□□□ -0.46
TUBE1-210ENST00000604967 MGAT3Q09327 533 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 GRIK4Q16099 956 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 PRR16Q569H4 304 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
TUBE1-210ENST00000604967 RPUSD2Q8IZ73 545 aaKnown RBP12.15□□□□□ -0.46
TUBE1-210ENST00000604967 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 DAGLBQ8NCG7 672 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 GIMAP8Q8ND71 665 aaPredicted RBP12.15□□□□□ -0.46
TUBE1-210ENST00000604967 GTF3C6Q969F1 213 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 ZNF576Q9H609 170 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 PCDHA4Q9UN74 947 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 SLC4A7Q9Y6M7 1214 aa12.15□□□□□ -0.46
TUBE1-210ENST00000604967 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 IPO5O00410 1097 aaKnown RBP12.14□□□□□ -0.47
TUBE1-210ENST00000604967 GNA11P29992 359 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 NEK4P51957 841 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 NLRP5P59047 1200 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 AKAP17AQ02040 695 aaKnown RBP12.14□□□□□ -0.47
TUBE1-210ENST00000604967 PPFIA1Q13136 1202 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 B3GNT9Q6UX72 402 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 USP38Q8NB14 1042 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 NSUN7Q8NE18 718 aaKnown RBP12.14□□□□□ -0.47
TUBE1-210ENST00000604967 DBF4BQ8NFT6 615 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 TBCKQ8TEA7 893 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 TNFRSF25Q93038 417 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 MBOAT7Q96N66 472 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 PHF20Q9BVI0 1012 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 FTOQ9C0B1 505 aaKnown RBP eCLIP12.14□□□□□ -0.47
TUBE1-210ENST00000604967 SLKQ9H2G2 1235 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-210ENST00000604967 EHMT1Q9H9B1 1298 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 ERAP1Q9NZ08 941 aa12.14□□□□□ -0.47
TUBE1-210ENST00000604967 NRCAMQ92823 1304 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 VCANP13611 3396 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 RFXAPO00287 272 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 CPLX1O14810 134 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 SLC37A4O43826 429 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 ZNF862O60290 1169 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 CA3P07451 260 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 PFKMP08237 780 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 ZNF76P36508 570 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 IGBP1P78318 339 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 UGCGQ16739 394 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 PLEKHG4Q58EX7 1191 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 HERC6Q8IVU3 1022 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
TUBE1-210ENST00000604967 GLG1Q92896 1179 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 SLC5A5Q92911 643 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 ZNF577Q9BSK1 485 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 SMARCAD1Q9H4L7 1026 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
TUBE1-210ENST00000604967 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
TUBE1-210ENST00000604967 TMEM265A0A087WTH1 108 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 CYP3A7-CYP3A51PA0A087WV96 503 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.12□□□□□ -0.47
TUBE1-210ENST00000604967 STBD1O95210 358 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 CYP3A7P24462 503 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 STAT5BP51692 787 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 FOSBP53539 338 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 NR5A1Q13285 461 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 INF2Q27J81 1249 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 SWSAP1Q6NVH7 229 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 CNKSR3Q6P9H4 555 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 RPAINQ86UA6 219 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 TRIM22Q8IYM9 498 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 CCDC155Q8N6L0 562 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 ETNPPLQ8TBG4 499 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 DNAJB3Q8WWF6 145 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 LINC01599Q8WXQ3 324 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 AGO3Q9H9G7 860 aaKnown RBP12.12□□□□□ -0.47
TUBE1-210ENST00000604967 CDHR5Q9HBB8 845 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 TUBE1Q9UJT0 475 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 PCDHA11Q9Y5I1 949 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 COL4A6Q14031 1691 aa12.12□□□□□ -0.47
TUBE1-210ENST00000604967 TMEM150BA6NC51 233 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 PSMD10O75832 226 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
TUBE1-210ENST00000604967 USP11P51784 963 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 TAP1Q03518 808 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 TMEM62Q0P6H9 643 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 LPIN1Q14693 890 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 KRT40Q6A162 431 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 FAM49AQ9H0Q0 323 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-210ENST00000604967 UNC45AQ9H3U1 944 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 PRDM6Q9NQX0 595 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-210ENST00000604967 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-210ENST00000604967 XIRP2A4UGR9 3374 aa12.11□□□□□ -0.47
TUBE1-210ENST00000604967 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms