RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 RAB34Q9BZG1 259 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 KRIT1O00522 736 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 KIF1CO43896 1103 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 ITGA4P13612 1032 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 XRCC4Q13426 336 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 IFI16Q16666 785 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 PTPROQ16827 1216 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 KCTD19Q17RG1 926 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 CCT6BQ92526 530 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 LRRC4CQ9HCJ2 640 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 PCDHA2Q9Y5H9 948 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 PHF20L1A8MW92 1017 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 CCDC188H7C350 402 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 ITPK1Q13572 414 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 DNAAF5Q86Y56 855 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 ZC3H3Q8IXZ2 948 aaKnown RBP16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 RASGEF1CQ8N431 466 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 TPCN2Q8NHX9 752 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 SEC14L1Q92503 715 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 P3H4Q92791 437 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 SLITRK6Q9H5Y7 841 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 AMACRQ9UHK6 382 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 ODF2LQ9ULJ1 636 aa16.68■□□□□ 0.26
LYSMD4-211ENST00000604213 F8VZ95 297 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 SMARCA1P28370 1054 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 NF2P35240 595 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 GKAP1Q5VSY0 366 aaPredicted RBP16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 TAX1BP1Q86VP1 789 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 KCTD10Q9H3F6 313 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 NAGPAQ9UK23 515 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 STXBP5LQ9Y2K9 1186 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 MYH4Q9Y623 1939 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 F8W031 263 aaPredicted RBP16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 SSBP05455 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 ACTN1P12814 892 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 SPTY2D1Q68D10 685 aaPredicted RBP16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 SLFN11Q7Z7L1 901 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 N4BP2L2Q92802 583 aaPredicted RBP16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 TLCD1Q96CP7 247 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 KDM4CQ9H3R0 1056 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 ATAD5Q96QE3 1844 aa16.67■□□□□ 0.26
LYSMD4-211ENST00000604213 TTI1O43156 1089 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 DNAJC8O75937 253 aaPredicted RBP16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 GHRP10912 638 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 DHX9Q08211 1270 aaKnown RBP16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 KCNH2Q12809 1159 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 KRT71Q3SY84 523 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 TXNRD3Q86VQ6 643 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 CEP57Q86XR8 500 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 HVCN1Q96D96 273 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 PSMD1Q99460 953 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 NENFQ9UMX5 172 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 CPLX4Q7Z7G2 160 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 SCFD1Q8WVM8 642 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 UBA5Q9GZZ9 404 aa16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 SUCLA2Q9P2R7 463 aaPredicted RBP16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 SAP30BPQ9UHR5 308 aaKnown RBP16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 BZW2Q9Y6E2 419 aaKnown RBP16.66■□□□□ 0.26
LYSMD4-211ENST00000604213 SNED1Q8TER0 1413 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 A0A0G2JS52 829 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 ATP2C2O75185 946 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 EPS15P42566 896 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 ADAM9Q13443 819 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 ERMARDQ5T6L9 678 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 ALKBH5Q6P6C2 394 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 CCDC26Q8TAB7 109 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 MDM1Q8TC05 714 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 CENPTQ96BT3 561 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 SCLT1Q96NL6 688 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 XPO6Q96QU8 1125 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 TXLNGYQ9BZA5 131 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 CNOT10Q9H9A5 744 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 OPLAHO14841 1288 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 PPIP5K2O43314 1243 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 MGRN1O60291 552 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 SLC9A1P19634 815 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 ADCY7P51828 1080 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 SIK1P57059 783 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 RPS8P62241 208 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 POU5F1Q01860 360 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 IFFO1Q0D2I5 559 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 PEX26Q7Z412 305 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 HAS1Q92839 578 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 CHMP6Q96FZ7 201 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 EYA3Q99504 573 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 CELF4Q9BZC1 486 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 RIOX1Q9H6W3 641 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 FAM114A2Q9NRY5 505 aa16.65■□□□□ 0.26
LYSMD4-211ENST00000604213 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms