RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 TMEM94Q12767 1356 aa6.68□□□□□ -1.34
FOCAD-210ENST00000603844 NPC1L1Q9UHC9 1359 aa6.68□□□□□ -1.34
FOCAD-210ENST00000603844 CD163L1Q9NR16 1453 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 STRCP1A6NGW2 1772 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 CYR61O00622 381 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 PPM1BO75688 479 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 SLPIP03973 132 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 FUCA1P04066 466 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 ACVRL1P37023 503 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 SURF1Q15526 300 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 GNPTABQ3T906 1256 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 CRIP3Q6Q6R5 217 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 CD300LDQ6UXZ3 194 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 ARHGEF39Q8N4T4 335 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 FAM26EQ8N5C1 309 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 PLEKHO2Q8TD55 490 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 LCORQ96JN0 433 aaPredicted RBP6.67□□□□□ -1.34
FOCAD-210ENST00000603844 MRIQ9BWK5 157 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 BCL11AQ9H165 835 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 CGGBP1Q9UFW8 167 aaPredicted RBP6.67□□□□□ -1.34
FOCAD-210ENST00000603844 SLC12A7Q9Y666 1083 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 NSD2O96028 1365 aa6.67□□□□□ -1.34
FOCAD-210ENST00000603844 LAMTOR5O43504 91 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 ITGA1P56199 1179 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 CCDC27Q2M243 656 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 ADAT2Q7Z6V5 191 aaKnown RBP6.66□□□□□ -1.34
FOCAD-210ENST00000603844 MORC1Q86VD1 984 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 ZC3H18Q86VM9 953 aaKnown RBP6.66□□□□□ -1.34
FOCAD-210ENST00000603844 RCC1LQ96I51 464 aaKnown RBP6.66□□□□□ -1.34
FOCAD-210ENST00000603844 BCL2L13Q9BXK5 485 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 AP5M1Q9H0R1 490 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 PHAXQ9H814 394 aaKnown RBP6.66□□□□□ -1.34
FOCAD-210ENST00000603844 MON2Q7Z3U7 1717 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 ZNF335Q9H4Z2 1342 aaPredicted RBP6.66□□□□□ -1.34
FOCAD-210ENST00000603844 KIF20BQ96Q89 1820 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 MSH6P52701 1360 aa6.66□□□□□ -1.34
FOCAD-210ENST00000603844 EDC4Q6P2E9 1401 aaKnown RBP6.66□□□□□ -1.34
FOCAD-210ENST00000603844 AKAP12Q02952 1782 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 DDX3XO00571 662 aaKnown RBP eCLIP6.65□□□□□ -1.34
FOCAD-210ENST00000603844 EPHX1P07099 455 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 ATF3P18847 181 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 LDLRAD1Q5T700 205 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.65□□□□□ -1.34
FOCAD-210ENST00000603844 TMEM87AQ8NBN3 555 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 NGDNQ8NEJ9 315 aaKnown RBP6.65□□□□□ -1.34
FOCAD-210ENST00000603844 GIPC2Q8TF65 315 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 FGD4Q96M96 766 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 CDK5RAP1Q96SZ6 601 aaKnown RBP6.65□□□□□ -1.34
FOCAD-210ENST00000603844 MENTQ9BUN1 341 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 PPP4R1LQ9P1A2 415 aa6.65□□□□□ -1.34
FOCAD-210ENST00000603844 BRD4O60885 1362 aaPredicted RBP6.65□□□□□ -1.35
FOCAD-210ENST00000603844 DCCP43146 1447 aa6.65□□□□□ -1.35
FOCAD-210ENST00000603844 CPSF1Q10570 1443 aaKnown RBP6.65□□□□□ -1.35
FOCAD-210ENST00000603844 NCOA3Q9Y6Q9 1424 aa6.65□□□□□ -1.35
FOCAD-210ENST00000603844 LRRC7Q96NW7 1537 aa6.65□□□□□ -1.35
FOCAD-210ENST00000603844 SGSM2O43147 1006 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 B4GALT3O60512 393 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 PPP2R1AP30153 589 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 TNNT2P45379 298 aaPredicted RBP6.64□□□□□ -1.35
FOCAD-210ENST00000603844 ICAM4Q14773 271 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 PLEKHH3Q7Z736 793 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 STK32CQ86UX6 486 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 PMFBP1Q8TBY8 1022 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 SEC14L1Q92503 715 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 MMP19Q99542 508 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 MARCH2Q9P0N8 246 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 ACEP12821 1306 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 USP6P35125 1406 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 NRKQ7Z2Y5 1582 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 ANKRD26Q9UPS8 1709 aa6.64□□□□□ -1.35
FOCAD-210ENST00000603844 RGPD8O14715 1765 aaPredicted RBP6.63□□□□□ -1.35
FOCAD-210ENST00000603844 POLR3AO14802 1390 aaPredicted RBP6.63□□□□□ -1.35
FOCAD-210ENST00000603844 FZD7O75084 574 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 ZNF76P36508 570 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 SLC7A5Q01650 507 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 KIF1AQ12756 1690 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 ZFPM1Q8IX07 1006 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 DPF3Q92784 378 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 KLC2Q9H0B6 622 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 CD248Q9HCU0 757 aa6.63□□□□□ -1.35
FOCAD-210ENST00000603844 C1orf167Q5SNV9 1468 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 MST1RQ04912 1400 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 TTC21BQ7Z4L5 1316 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 SLC6A11P48066 632 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 MBLAC2Q68D91 279 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 USP51Q70EK9 711 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 NME9Q86XW9 330 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 FAM126BQ8IXS8 530 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 FAM9BQ8IZU0 186 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 C19orf47Q8N9M1 422 aaKnown RBP6.62□□□□□ -1.35
FOCAD-210ENST00000603844 COPS5Q92905 334 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 CRBNQ96SW2 442 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 ZNF747Q9BV97 191 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 SLITRK6Q9H5Y7 841 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 NGRNQ9NPE2 291 aaKnown RBP6.62□□□□□ -1.35
FOCAD-210ENST00000603844 CLEC1BQ9P126 229 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 PCDHB10Q9UN67 800 aa6.62□□□□□ -1.35
FOCAD-210ENST00000603844 TTC21AQ8NDW8 1320 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms