RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	TXLNGY	Q9BZA5	131 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	RAB17	Q9H0T7	212 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	IGHMBP2	P38935	993 aa	Known RBP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	DHX9	Q08211	1270 aa	Known RBP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	NONO	Q15233	471 aa	Known RBP eCLIP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	SBK1	Q52WX2	424 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	SYCE1	Q8N0S2	351 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	MARCH10	Q8NA82	808 aa	Predicted RBP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	NSMCE1	Q8WV22	266 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	LARP4B	Q92615	738 aa	Known RBP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	ANKRD27	Q96NW4	1050 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	MMTAG2	Q9BU76	263 aa	Known RBP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	HOMER3	Q9NSC5	361 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	TTC7A	Q9ULT0	858 aa	Predicted RBP	21.31	■■□□□ 1
STRN4-222	ENST00000601869	MAST2	Q6P0Q8	1798 aa		21.31	■■□□□ 1
STRN4-222	ENST00000601869	USP17L12	C9JPN9	530 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	USP17L21	D6R901	530 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	KRIT1	O00522	736 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	ZPR1	O75312	459 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	ZBTB48	P10074	688 aa	Predicted RBP	21.3	■■□□□ 1
STRN4-222	ENST00000601869	MMP13	P45452	471 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	POLR2F	P61218	127 aa	Known RBP	21.3	■■□□□ 1
STRN4-222	ENST00000601869	ZCWPW2	Q504Y3	356 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	ZNF34	Q8IZ26	560 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	SPAG5	Q96R06	1193 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	SUCLA2	Q9P2R7	463 aa	Predicted RBP	21.3	■■□□□ 1
STRN4-222	ENST00000601869	ABCF2	Q9UG63	623 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	SPATA31A5	Q5VU36	1347 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869	SPATA31A7	Q8IWB4	1347 aa		21.3	■■□□□ 1
STRN4-222	ENST00000601869		A0A0A6YYK5	440 aa	Predicted RBP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	TSPY2	A6NKD2	308 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	ATP2C2	O75185	946 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	RNASE9	P60153	205 aa	Known RBP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	RAPGEF1	Q13905	1077 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	L3MBTL3	Q96JM7	780 aa	Predicted RBP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	ATP8A2	Q9NTI2	1148 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	MYMK	A6NI61	221 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	DAPK3	O43293	454 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	PPP1R12B	O60237	982 aa	Predicted RBP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	NMT2	O60551	498 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	MME	P08473	750 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	ZNF131	P52739	623 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	INTS5	Q6P9B9	1019 aa	Known RBP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	NEK8	Q86SG6	692 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	DDX42	Q86XP3	938 aa	Known RBP eCLIP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	MYOCD	Q8IZQ8	938 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	GBP7	Q8N8V2	638 aa	Predicted RBP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	ZMYND12	Q9H0C1	365 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	BLOC1S4	Q9NUP1	217 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	CCDC87	Q9NVE4	849 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	TRPC6	Q9Y210	931 aa		21.29	■■□□□ 1
STRN4-222	ENST00000601869	DIS3	Q9Y2L1	958 aa	Known RBP	21.29	■■□□□ 1
STRN4-222	ENST00000601869	CCDC169	A6NNP5	214 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	RPSA	P08865	295 aa	Known RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	IBSP	P21815	317 aa	Predicted RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	NPEPPS	P55786	919 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	DYNLL1	P63167	89 aa	Known RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	MYO1E	Q12965	1108 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	CLUL1	Q15846	466 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	ACCSL	Q4AC99	568 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	TRPM8	Q7Z2W7	1104 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	SLFN11	Q7Z7L1	901 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	ATXN2L	Q8WWM7	1075 aa	Known RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	HPS3	Q969F9	1004 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	TBC1D31	Q96DN5	1066 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	STAMBPL1	Q96FJ0	436 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	FMO2	Q99518	471 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	CRNKL1	Q9BZJ0	848 aa	Known RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	STMN4	Q9H169	189 aa	Predicted RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	CCNT1	O60563	726 aa	Known RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	CCND1	P24385	295 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	LMNB2	Q03252	620 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	GRB10	Q13322	594 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	CCDC152	Q4G0S7	254 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	PNMA1	Q8ND90	353 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	CDK5RAP3	Q96JB5	506 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	DDX47	Q9H0S4	455 aa	Known RBP	21.28	■■□□□ 1
STRN4-222	ENST00000601869	ADAMTS1	Q9UHI8	967 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	INTU	Q9ULD6	942 aa		21.28	■■□□□ 1
STRN4-222	ENST00000601869	DCDC2C	A8MYV0	355 aa		21.27	■■□□□ 1
STRN4-222	ENST00000601869	CRKL	P46109	303 aa	Known RBP	21.27	■■□□□ 1
STRN4-222	ENST00000601869	FXR2	P51116	673 aa	Known RBP eCLIP	21.27	■■□□□ 1
STRN4-222	ENST00000601869	HEATR3	Q7Z4Q2	680 aa		21.27	■■□□□ 1
STRN4-222	ENST00000601869	METTL13	Q8N6R0	699 aa		21.27	■■□□□ 1
STRN4-222	ENST00000601869	PACSIN1	Q9BY11	444 aa		21.27	■■□□□ 1
STRN4-222	ENST00000601869	RAB34	Q9BZG1	259 aa		21.27	■■□□□ 1
STRN4-222	ENST00000601869	GAN	Q9H2C0	597 aa		21.27	■■□□□ 1
STRN4-222	ENST00000601869	KCNMB3	Q9NPA1	279 aa		21.27	■■□□□ 1
STRN4-222	ENST00000601869	LOC102724428	A0A0B4J2F2	783 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	SNAP23	O00161	211 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	ANP32D	O95626	131 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	CHN1	P15882	459 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	GNA11	P29992	359 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	FLT3	P36888	993 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	SIK1	P57059	783 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	FAM47A	Q5JRC9	791 aa		21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	CDCA2	Q69YH5	1023 aa	Predicted RBP	21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	BZW1	Q7L1Q6	419 aa	Known RBP	21.27	■□□□□ 0.99
STRN4-222	ENST00000601869	TRIM59	Q8IWR1	403 aa		21.27	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms