RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 NFASCO94856 1347 aa19.42■□□□□ 0.7
SCAF1-204ENST00000601038 KLF18A0A0U1RQI7 1052 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 SMCO2A6NFE2 343 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 GOLGA8AA7E2F4 631 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 GOLGA8BA8MQT2 603 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 RPLP2P05387 115 aaKnown RBP19.41■□□□□ 0.7
SCAF1-204ENST00000601038 GHRP10912 638 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 MGAT3Q09327 533 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 EPC2Q52LR7 807 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 CEP55Q53EZ4 464 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 DNAJB3Q8WWF6 145 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 PGBD1Q96JS3 809 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 SDF4Q9BRK5 362 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 ANO3Q9BYT9 981 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 AZI2Q9H6S1 392 aa19.41■□□□□ 0.7
SCAF1-204ENST00000601038 MEIS1O00470 390 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 ARP10275 920 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 INSRRP14616 1297 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 CDC27P30260 824 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 ACTR2P61160 394 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 AP3B2Q13367 1082 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 LPIN1Q14693 890 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 PLPPR4Q7Z2D5 763 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 MRPL38Q96DV4 380 aaKnown RBP19.4■□□□□ 0.7
SCAF1-204ENST00000601038 REV3LO60673 3130 aa19.4■□□□□ 0.7
SCAF1-204ENST00000601038 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.39■□□□□ 0.69
SCAF1-204ENST00000601038 CCDC196A0A1B0GTZ2 297 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 H3BNC9 293 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 SREBF1P36956 1147 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 CLK2P49760 499 aaKnown RBP19.39■□□□□ 0.69
SCAF1-204ENST00000601038 IGBP1P78318 339 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 PTPROQ16827 1216 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 FBXO47Q5MNV8 452 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 TMEM192Q8IY95 271 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 KCNB2Q92953 911 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 IL17RAQ96F46 866 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 AGO4Q9HCK5 861 aaKnown RBP19.39■□□□□ 0.69
SCAF1-204ENST00000601038 CDY2AQ9Y6F7 541 aa19.39■□□□□ 0.69
SCAF1-204ENST00000601038 MUC3AQ02505 3323 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 ENPP3O14638 875 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 ATG7O95352 703 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 STAT5BP51692 787 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 MRPS6P82932 125 aaKnown RBP19.38■□□□□ 0.69
SCAF1-204ENST00000601038 FGD1P98174 961 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 ITGB3BPQ13352 177 aaPredicted RBP19.38■□□□□ 0.69
SCAF1-204ENST00000601038 COL4A6Q14031 1691 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 PFKFB3Q16875 520 aaPredicted RBP19.38■□□□□ 0.69
SCAF1-204ENST00000601038 IER5Q5VY09 327 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 TSHZ1Q6ZSZ6 1077 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 NIPA1Q7RTP0 329 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 TMEM260Q9NX78 707 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 TRPC6Q9Y210 931 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 SQORQ9Y6N5 450 aa19.38■□□□□ 0.69
SCAF1-204ENST00000601038 ADD1P35611 737 aaKnown RBP19.37■□□□□ 0.69
SCAF1-204ENST00000601038 ZNF76P36508 570 aa19.37■□□□□ 0.69
SCAF1-204ENST00000601038 SLC26A2P50443 739 aa19.37■□□□□ 0.69
SCAF1-204ENST00000601038 GPM6BQ13491 265 aa19.37■□□□□ 0.69
SCAF1-204ENST00000601038 PLCB4Q15147 1175 aa19.37■□□□□ 0.69
SCAF1-204ENST00000601038 FAM49AQ9H0Q0 323 aaPredicted RBP19.37■□□□□ 0.69
SCAF1-204ENST00000601038 UBE2ZQ9H832 354 aaPredicted RBP19.37■□□□□ 0.69
SCAF1-204ENST00000601038 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
SCAF1-204ENST00000601038 PCDHA2Q9Y5H9 948 aa19.37■□□□□ 0.69
SCAF1-204ENST00000601038 BRWD1Q9NSI6 2320 aa19.36■□□□□ 0.69
SCAF1-204ENST00000601038 IGKV6D-21A0A0A0MT36 114 aa19.36■□□□□ 0.69
SCAF1-204ENST00000601038 POTEB3A0JP26 581 aa19.36■□□□□ 0.69
SCAF1-204ENST00000601038 SCG2P13521 617 aa19.36■□□□□ 0.69
SCAF1-204ENST00000601038 METAP2P50579 478 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCAF1-204ENST00000601038 POTEBQ6S5H4 581 aa19.36■□□□□ 0.69
SCAF1-204ENST00000601038 FIBCD1Q8N539 461 aa19.36■□□□□ 0.69
SCAF1-204ENST00000601038 ZBTB10Q96DT7 871 aa19.36■□□□□ 0.69
SCAF1-204ENST00000601038 AGO3Q9H9G7 860 aaKnown RBP19.36■□□□□ 0.69
SCAF1-204ENST00000601038 ESYT2A0FGR8 921 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 M0QZ92 97 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 CYP3A4P08684 503 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 CPA1P15085 419 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 HSPA4P34932 840 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 APOBRQ0VD83 1088 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 LEXMQ3ZCV2 418 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 TIGD5Q53EQ6 642 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 JAKMIP3Q5VZ66 844 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 Q6ZUG5 572 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 FBXL16Q8N461 479 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 CRYGNQ8WXF5 182 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
SCAF1-204ENST00000601038 ZMYND12Q9H0C1 365 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 TRPV2Q9Y5S1 764 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 TTC3P53804 2025 aa19.35■□□□□ 0.69
SCAF1-204ENST00000601038 FAM86B1E9PN63 330 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 C5orf67F2Z3F1 127 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 CCNE2O96020 404 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 RB1P06400 928 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 FAM86B2P0C5J1 330 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 COL9A1P20849 921 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 MCTP2Q6DN12 878 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 BLOC1S2Q6QNY1 142 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 ABHD15Q6UXT9 468 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 PLA2G4DQ86XP0 818 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 NME8Q8N427 588 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 BANK1Q8NDB2 785 aa19.34■□□□□ 0.69
SCAF1-204ENST00000601038 CCDC12Q8WUD4 166 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms