RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 JADE2Q9NQC1 790 aa24.27■■□□□ 1.48
PNKP-212ENST00000599454 PRKAG3Q9UGI9 489 aa24.27■■□□□ 1.48
PNKP-212ENST00000599454 SUPT16HQ9Y5B9 1047 aaKnown RBP24.27■■□□□ 1.48
PNKP-212ENST00000599454 FAM86C2PA6NEL3 165 aa24.26■■□□□ 1.47
PNKP-212ENST00000599454 RRN3P2A6NIE6 340 aa24.26■■□□□ 1.47
PNKP-212ENST00000599454 H3BQ06 376 aaPredicted RBP24.26■■□□□ 1.47
PNKP-212ENST00000599454 ENPP3O14638 875 aa24.26■■□□□ 1.47
PNKP-212ENST00000599454 HOXD11P31277 338 aaPredicted RBP24.26■■□□□ 1.47
PNKP-212ENST00000599454 FBXO47Q5MNV8 452 aa24.26■■□□□ 1.47
PNKP-212ENST00000599454 TEX2Q8IWB9 1127 aa24.26■■□□□ 1.47
PNKP-212ENST00000599454 DNAJB3Q8WWF6 145 aa24.26■■□□□ 1.47
PNKP-212ENST00000599454 CLP1Q92989 425 aaKnown RBP24.26■■□□□ 1.47
PNKP-212ENST00000599454 SQORQ9Y6N5 450 aa24.26■■□□□ 1.47
PNKP-212ENST00000599454 PRR33A8MZF0 331 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 LINC00271P0C7V0 271 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 MARK3P27448 753 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 MARCH8Q5T0T0 291 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 PCDHA6Q9UN73 950 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 PCDHA8Q9Y5H6 950 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 SLC12A7Q9Y666 1083 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 CDY2AQ9Y6F7 541 aa24.25■■□□□ 1.47
PNKP-212ENST00000599454 PIEZO1Q92508 2521 aa24.24■■□□□ 1.47
PNKP-212ENST00000599454 MRPS6P82932 125 aaKnown RBP24.24■■□□□ 1.47
PNKP-212ENST00000599454 IER5Q5VY09 327 aa24.24■■□□□ 1.47
PNKP-212ENST00000599454 EP400NLQ6ZTU2 488 aa24.24■■□□□ 1.47
PNKP-212ENST00000599454 TMTC3Q6ZXV5 915 aa24.24■■□□□ 1.47
PNKP-212ENST00000599454 CMTR1Q8N1G2 835 aaKnown RBP24.24■■□□□ 1.47
PNKP-212ENST00000599454 ZNF689Q96CS4 500 aaPredicted RBP24.24■■□□□ 1.47
PNKP-212ENST00000599454 PLVAPQ9BX97 442 aa24.24■■□□□ 1.47
PNKP-212ENST00000599454 FTHL17Q9BXU8 183 aa24.24■■□□□ 1.47
PNKP-212ENST00000599454 LSG1Q9H089 658 aaKnown RBP24.24■■□□□ 1.47
PNKP-212ENST00000599454 JPH1Q9HDC5 661 aaPredicted RBP24.24■■□□□ 1.47
PNKP-212ENST00000599454 CLDND1Q9NY35 253 aa24.24■■□□□ 1.47
PNKP-212ENST00000599454 RXRAP19793 462 aa24.23■■□□□ 1.47
PNKP-212ENST00000599454 BTG3Q14201 252 aaPredicted RBP24.23■■□□□ 1.47
PNKP-212ENST00000599454 UBE2SQ16763 222 aa24.23■■□□□ 1.47
PNKP-212ENST00000599454 FANCBQ8NB91 859 aa24.23■■□□□ 1.47
PNKP-212ENST00000599454 AZI2Q9H6S1 392 aa24.23■■□□□ 1.47
PNKP-212ENST00000599454 PKD2L1Q9P0L9 805 aa24.23■■□□□ 1.47
PNKP-212ENST00000599454 MYH9P35579 1960 aaKnown RBP24.23■■□□□ 1.47
PNKP-212ENST00000599454 EVPLQ92817 2033 aa24.23■■□□□ 1.47
PNKP-212ENST00000599454 SLC27A2O14975 620 aa24.22■■□□□ 1.47
PNKP-212ENST00000599454 CTC1Q2NKJ3 1217 aa24.22■■□□□ 1.47
PNKP-212ENST00000599454 FAM43BQ6ZT52 329 aaPredicted RBP24.22■■□□□ 1.47
PNKP-212ENST00000599454 SGMS1Q86VZ5 419 aa24.22■■□□□ 1.47
PNKP-212ENST00000599454 SLC9A2Q9UBY0 812 aa24.22■■□□□ 1.47
PNKP-212ENST00000599454 NFASCO94856 1347 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 M0QZ92 97 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 GRM6O15303 877 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 DGKIO75912 1065 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 INSRRP14616 1297 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 IGBP1P78318 339 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 ZP2Q05996 745 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 HEATR3Q7Z4Q2 680 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 CMTR2Q8IYT2 770 aaKnown RBP24.21■■□□□ 1.47
PNKP-212ENST00000599454 P2RX5Q93086 422 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 MXRA8Q9BRK3 442 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 SDF4Q9BRK5 362 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 TRPV2Q9Y5S1 764 aa24.21■■□□□ 1.47
PNKP-212ENST00000599454 hCG_1642624A0A1W2PR95 340 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 DCXO43602 365 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 MMP1P03956 469 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 LTBRP36941 435 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 NAALADL2Q58DX5 795 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 CREB3L3Q68CJ9 461 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 SYNE3Q6ZMZ3 975 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 PLPPR4Q7Z2D5 763 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 ADHFE1Q8IWW8 467 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 CCDC82Q8N4S0 544 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 PCYT2Q99447 389 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 FAM49AQ9H0Q0 323 aaPredicted RBP24.2■■□□□ 1.46
PNKP-212ENST00000599454 AGO3Q9H9G7 860 aaKnown RBP24.2■■□□□ 1.46
PNKP-212ENST00000599454 KCNH7Q9NS40 1196 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 TRPC6Q9Y210 931 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 PCDHA2Q9Y5H9 948 aa24.2■■□□□ 1.46
PNKP-212ENST00000599454 C19orf67A6NJJ6 358 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 FOSP01100 380 aaPredicted RBP24.19■■□□□ 1.46
PNKP-212ENST00000599454 CD52P31358 61 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 HYAL1Q12794 435 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 NECTIN1Q15223 517 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 CSPP1Q1MSJ5 1256 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 PPP1R18Q6NYC8 613 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 MICU3Q86XE3 530 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 NPAS4Q8IUM7 802 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 PPP2R3CQ969Q6 453 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 ESYT1Q9BSJ8 1104 aa24.19■■□□□ 1.46
PNKP-212ENST00000599454 UPF3BQ9BZI7 483 aaKnown RBP24.19■■□□□ 1.46
PNKP-212ENST00000599454 RBM28Q9NW13 759 aaKnown RBP24.19■■□□□ 1.46
PNKP-212ENST00000599454 IGSF9BQ9UPX0 1349 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 KDM3AQ9Y4C1 1321 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 FNDC1Q4ZHG4 1894 aaPredicted RBP24.18■■□□□ 1.46
PNKP-212ENST00000599454 POTEB3A0JP26 581 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 STAG3L1P0CL83 205 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 SLC26A2P50443 739 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 POTEBQ6S5H4 581 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 RAB11FIP4Q86YS3 637 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 NME8Q8N427 588 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 LINC01599Q8WXQ3 324 aa24.18■■□□□ 1.46
PNKP-212ENST00000599454 POP1Q99575 1024 aaKnown RBP24.18■■□□□ 1.46
PNKP-212ENST00000599454 RIC8AQ9NPQ8 531 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms