RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 EXOC4Q96A65 974 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 DYDC2Q96IM9 177 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 PCDHB6Q9Y5E3 794 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 HMGB1P1B2RPK0 211 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-208ENST00000599343 ARHGDIAP52565 204 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 NOP14P78316 857 aaKnown RBP12.74□□□□□ -0.37
SCN8A-208ENST00000599343 KCTD2Q14681 263 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 NRBF2Q96F24 287 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 TMEM206Q9H813 350 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 SLC12A6Q9UHW9 1150 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 FBXO38Q6PIJ6 1188 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 ARMC9Q7Z3E5 817 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 SIX6OS1Q8N1H7 587 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 NCLNQ969V3 563 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCN8A-208ENST00000599343 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 SAYSD1Q9NPB0 183 aa12.74□□□□□ -0.37
SCN8A-208ENST00000599343 CCDC151A5D8V7 595 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 PDE8BO95263 885 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 KITP10721 976 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 KRT10P13645 584 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 EPHB1P54762 984 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 C6orf118Q5T5N4 469 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 RNF207Q6ZRF8 634 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 CENPUQ71F23 418 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 SYT2Q8N9I0 419 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-208ENST00000599343 DCPSQ96C86 337 aaKnown RBP12.73□□□□□ -0.37
SCN8A-208ENST00000599343 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 HACD3Q9P035 362 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 SPAG7O75391 227 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 FGGP02679 453 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 PMLP29590 882 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 MXI1P50539 228 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 SNAP25P60880 206 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 NSUN2Q08J23 767 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCN8A-208ENST00000599343 EEPD1Q7L9B9 569 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 PDCLQ13371 301 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 TTC1Q99614 292 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 UPF3AQ9H1J1 476 aaKnown RBP12.73□□□□□ -0.37
SCN8A-208ENST00000599343 PPARGC1AQ9UBK2 798 aaKnown RBP12.73□□□□□ -0.37
SCN8A-208ENST00000599343 CCND2P30279 289 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 GPATCH4Q5T3I0 446 aaKnown RBP12.73□□□□□ -0.37
SCN8A-208ENST00000599343 RNF14Q9UBS8 474 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 FAM8A1Q9UBU6 413 aa12.73□□□□□ -0.37
SCN8A-208ENST00000599343 MMEP08473 750 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 PCP11498 1178 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 HSPA6P17066 643 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 HNRNPH2P55795 449 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 ADCY2Q08462 1091 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 PROSER3Q2NL68 480 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 USP17L2Q6R6M4 530 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 CRLF3Q8IUI8 442 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 LCORLQ8N3X6 602 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 PITPNM3Q9BZ71 974 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 ZMYM3Q14202 1370 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 LARGE1O95461 756 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 TMPRSS15P98073 1019 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 CTTNQ14247 550 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 ARID5BQ14865 1188 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 GLE1Q53GS7 698 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 TOGARAM2Q6ZUX3 1019 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 GSPT2Q8IYD1 628 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 MB21D1Q8N884 522 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 ENOX1Q8TC92 643 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 CCDC195A0A1B0GUA6 201 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 CCNE1P24864 410 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 FAM47EQ6ZV65 393 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 GIPC2Q8TF65 315 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 AIFM3Q96NN9 605 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 TRIM15Q9C019 465 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 SLC13A4Q9UKG4 626 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 EIF4E1BA6NMX2 242 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 SFI1A8K8P3 1242 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 CHEK2O96017 543 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 GNL1P36915 607 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 KLC3Q6P597 504 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 TSC22D3Q99576 134 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 WDR11Q9BZH6 1224 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 EIF3BP55884 814 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
SCN8A-208ENST00000599343 SEPT8Q92599 483 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 PANX2Q96RD6 677 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 PARVGQ9HBI0 331 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 USP21Q9UK80 565 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
SCN8A-208ENST00000599343 TEX14Q8IWB6 1497 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms