RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 GRIN2DO15399 1336 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 DCDC2CA8MYV0 355 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 EVI5O60447 810 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 DKC1O60832 514 aaKnown RBP eCLIP16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 F13A1P00488 732 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 PRPHP41219 470 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 TRIM60Q495X7 471 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 SWSAP1Q6NVH7 229 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 ANKRD33Q7Z3H0 272 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 CCDC60Q8IWA6 550 aaPredicted RBP16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 PCYT2Q99447 389 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 RAB34Q9BZG1 259 aa16.99■□□□□ 0.31
GTF2F1-206ENST00000598607 ATP2C1P98194 919 aaPredicted RBP16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 SPIRE1Q08AE8 756 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 EPHA7Q15375 998 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 PDXDC2PQ6P474 469 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 C4orf32Q8N8J7 132 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 NEK9Q8TD19 979 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 ATP6V0A1Q93050 837 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 GABBR1Q9UBS5 961 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 GTF2IRD1Q9UHL9 959 aa16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 MAFBQ9Y5Q3 323 aaPredicted RBP16.98■□□□□ 0.31
GTF2F1-206ENST00000598607 IGSF9BQ9UPX0 1349 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 PQBP1O60828 265 aaKnown RBP16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 GNAT1P11488 350 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 MARK3P27448 753 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 TLE2Q04725 743 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 ARL6IP4Q66PJ3 421 aaKnown RBP16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 FAM126BQ8IXS8 530 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 CKAP2LQ8IYA6 745 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 FAM167AQ96KS9 214 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 HDAC6Q9UBN7 1215 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 NR2E3Q9Y5X4 410 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 STK24Q9Y6E0 443 aa16.97■□□□□ 0.31
GTF2F1-206ENST00000598607 NRCAMQ92823 1304 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 LTBP2Q14767 1821 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 POTEB3A0JP26 581 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 C17orf102A2RUQ5 167 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 EML1O00423 815 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 HBP1O60381 514 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 BRD1O95696 1058 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 P4HBP07237 508 aaKnown RBP16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 CLTBP09497 229 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 SMIM10L2AP0DMW4 78 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 SMIM10L2BP0DMW5 78 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 TECP42680 631 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 FXR2P51116 673 aaKnown RBP eCLIP16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 PDIA5Q14554 519 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 PLCB4Q15147 1175 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 SF3A1Q15459 793 aaKnown RBP16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 FOXD4L5Q5VV16 416 aaPredicted RBP16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 POTEBQ6S5H4 581 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 DTHD1Q6ZMT9 781 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 C7orf61Q8IZ16 206 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 ERMNQ8TAM6 284 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 FOXD4L4Q8WXT5 416 aaPredicted RBP16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 BBXQ8WY36 941 aaPredicted RBP16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 RNPEPQ9H4A4 650 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 PRKAG2Q9UGJ0 569 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 TRPC6Q9Y210 931 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 NOD1Q9Y239 953 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 TANC1Q9C0D5 1861 aa16.96■□□□□ 0.31
GTF2F1-206ENST00000598607 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.3
GTF2F1-206ENST00000598607 DNAH12Q6ZR08 3092 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 MKI67P46013 3256 aaKnown RBP16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 COL1A2P08123 1366 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 POTEMA6NI47 508 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 RRN3P2A6NIE6 340 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 CD4P01730 458 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 QARSP47897 775 aaKnown RBP16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 PSMC5P62195 406 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 NUCB2P80303 420 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 PPFIA1Q13136 1202 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 PKP1Q13835 747 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 PTGISQ16647 500 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 ATL3Q6DD88 541 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 FAM173BQ6P4H8 233 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 ATP8B4Q8TF62 1192 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 NRBP2Q9NSY0 501 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 ATP6V1DQ9Y5K8 247 aa16.95■□□□□ 0.3
GTF2F1-206ENST00000598607 B4GALT4O60513 344 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 HOXC8P31273 242 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 FAAP100Q0VG06 881 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 GDF6Q6KF10 455 aaPredicted RBP16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 EIF2AK1Q9BQI3 630 aaKnown RBP16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 TMEM39AQ9NV64 488 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 LRWD1Q9UFC0 647 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 CLIC4Q9Y696 253 aa16.94■□□□□ 0.3
GTF2F1-206ENST00000598607 OATP04181 439 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 INSRRP14616 1297 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 PRKCEQ02156 737 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 GRIK4Q16099 956 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 UGCGQ16739 394 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 XKR3Q5GH77 459 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 ZNF484Q5JVG2 852 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 C4orf19Q8IY42 314 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms