RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 ASIC2Q16515 512 aa16.98■□□□□ 0.31
IRF3-219ENST00000597636 ZCWPW2Q504Y3 356 aa16.98■□□□□ 0.31
IRF3-219ENST00000597636 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
IRF3-219ENST00000597636 KRT27Q7Z3Y8 459 aa16.98■□□□□ 0.31
IRF3-219ENST00000597636 FAM133AQ8N9E0 248 aa16.98■□□□□ 0.31
IRF3-219ENST00000597636 CHMP6Q96FZ7 201 aa16.98■□□□□ 0.31
IRF3-219ENST00000597636 FAXDC2Q96IV6 333 aa16.98■□□□□ 0.31
IRF3-219ENST00000597636 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.98■□□□□ 0.311e-10■■□□□ 11.4
IRF3-219ENST00000597636 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.98■□□□□ 0.31
IRF3-219ENST00000597636 CCDC188H7C350 402 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 TRAF5O00463 557 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 NAPAP54920 295 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 MECOMQ03112 1051 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 MSL1Q68DK7 614 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 MYOCDQ8IZQ8 938 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 CENPTQ96BT3 561 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 CDK5RAP3Q96JB5 506 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 GOLPH3Q9H4A6 298 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 CCT8L1PA6NM43 557 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 ATP6V1G2O95670 118 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 ZBTB48P10074 688 aaPredicted RBP16.97■□□□□ 0.31
IRF3-219ENST00000597636 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 C10orf76Q5T2E6 689 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 LRRC57Q8N9N7 239 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 DDX12PQ92771 950 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 XPO6Q96QU8 1125 aaKnown RBP16.97■□□□□ 0.31
IRF3-219ENST00000597636 NOC2LQ9Y3T9 749 aaKnown RBP16.97■□□□□ 0.31
IRF3-219ENST00000597636 A0A1B0GUL6 1792 aa16.97■□□□□ 0.31
IRF3-219ENST00000597636 F8VZ95 297 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 KRIT1O00522 736 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 DHX9Q08211 1270 aaKnown RBP16.96■□□□□ 0.31
IRF3-219ENST00000597636 IFI16Q16666 785 aaKnown RBP16.96■□□□□ 0.31
IRF3-219ENST00000597636 CASZ1Q86V15 1759 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 METTL13Q8N6R0 699 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 CCDC197Q8NCU1 140 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 TLCD1Q96CP7 247 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 NOD2Q9HC29 1040 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 AMACRQ9UHK6 382 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 SMCO2A6NFE2 343 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 HIBCHQ6NVY1 386 aaPredicted RBP16.96■□□□□ 0.31
IRF3-219ENST00000597636 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 MDM1Q8TC05 714 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 TBCKQ8TEA7 893 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 SEC14L1Q92503 715 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 RAD54LQ92698 747 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 SLITRK6Q9H5Y7 841 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 MTMR7Q9Y216 660 aa16.96■□□□□ 0.31
IRF3-219ENST00000597636 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
IRF3-219ENST00000597636 PPP1R7Q15435 360 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 SLC4A8Q2Y0W8 1093 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 FAM84BQ96KN1 310 aaPredicted RBP16.95■□□□□ 0.3
IRF3-219ENST00000597636 MTMR9Q96QG7 549 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 FAM129AQ9BZQ8 928 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 MCM9Q9NXL9 1143 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.37e-6■■■■■ 33.3
IRF3-219ENST00000597636 RTN2O75298 545 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 ITGA4P13612 1032 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 PAX7P23759 505 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 GNA11P29992 359 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 ORC2Q13416 577 aaPredicted RBP16.95■□□□□ 0.3
IRF3-219ENST00000597636 CCDC26Q8TAB7 109 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 CUL5Q93034 780 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 CEP63Q96MT8 703 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 LRRC27Q9C0I9 530 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 LRRC4CQ9HCJ2 640 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 CTNND1O60716 968 aaKnown RBP16.95■□□□□ 0.3
IRF3-219ENST00000597636 USP17L8P0C7I0 530 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 GBP2P32456 591 aaPredicted RBP16.95■□□□□ 0.3
IRF3-219ENST00000597636 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
IRF3-219ENST00000597636 EIF3BP55884 814 aaKnown RBP16.95■□□□□ 0.3
IRF3-219ENST00000597636 PTK2Q05397 1052 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 ZNF317Q96PQ6 595 aaPredicted RBP16.95■□□□□ 0.3
IRF3-219ENST00000597636 GANQ9H2C0 597 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.95■□□□□ 0.36e-9■■■□□ 17.9
IRF3-219ENST00000597636 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
IRF3-219ENST00000597636 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 TTI1O43156 1089 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 ECM2O94769 699 aaPredicted RBP16.94■□□□□ 0.3
IRF3-219ENST00000597636 GNA14O95837 355 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 RPSAP08865 295 aaKnown RBP16.94■□□□□ 0.3
IRF3-219ENST00000597636 PTPROQ16827 1216 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 TBC1D9BQ66K14 1250 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 LZTS2Q9BRK4 669 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 KANSL2Q9H9L4 492 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 FAM114A2Q9NRY5 505 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 KLRF2D3W0D1 207 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 PPP1R12BO60237 982 aaPredicted RBP16.94■□□□□ 0.3
IRF3-219ENST00000597636 GSTA1P08263 222 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 GOLGA8HP0CJ92 632 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 KCTD19Q17RG1 926 aaPredicted RBP16.94■□□□□ 0.3
IRF3-219ENST00000597636 FMNL3Q8IVF7 1028 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 RASGEF1CQ8N431 466 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 ANKS4BQ8N8V4 417 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 HOOK2Q96ED9 719 aa16.94■□□□□ 0.3
IRF3-219ENST00000597636 MARSP56192 900 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms