RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 FAM160B1Q5W0V3 765 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 MFSD5Q6N075 450 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 RDM1Q8NG50 284 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 PPP1R12CQ9BZL4 782 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 UNC45AQ9H3U1 944 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 NOD1Q9Y239 953 aa20.45■□□□□ 0.86
IRF3-216ENST00000597180 PITPNM1O00562 1244 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 BACH1O14867 736 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 TRAPPC10P48553 1259 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 JAK3P52333 1124 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 ADAM17P78536 824 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 ZNF200P98182 395 aaPredicted RBP20.44■□□□□ 0.86
IRF3-216ENST00000597180 PPP2R5CQ13362 524 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 ORC2Q13416 577 aaPredicted RBP20.44■□□□□ 0.86
IRF3-216ENST00000597180 PLCB4Q15147 1175 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
IRF3-216ENST00000597180 ZNF302Q9NR11 478 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 DISC1Q9NRI5 854 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 VAV3Q9UKW4 847 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 COLQQ9Y215 455 aaPredicted RBP20.44■□□□□ 0.86
IRF3-216ENST00000597180 MAFBQ9Y5Q3 323 aaPredicted RBP20.44■□□□□ 0.86
IRF3-216ENST00000597180 UMODL1Q5DID0 1318 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 NRCAMQ92823 1304 aa20.44■□□□□ 0.86
IRF3-216ENST00000597180 H3BQV1 296 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 NEMFO60524 1076 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 GNAT1P11488 350 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 CYP2C18P33260 490 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 RBL2Q08999 1139 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 PPFIA1Q13136 1202 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 PTK7Q13308 1070 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 SWSAP1Q6NVH7 229 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 SERINC5Q86VE9 423 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 SLFN12Q8IYM2 578 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 LMBR1Q8WVP7 490 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 DHX38Q92620 1227 aaKnown RBP20.43■□□□□ 0.86
IRF3-216ENST00000597180 ATP6V0A1Q93050 837 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 WNT8AQ9H1J5 351 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 SETD4Q9NVD3 440 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 SAMM50Q9Y512 469 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 IGSF9BQ9UPX0 1349 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 EVPLQ92817 2033 aa20.43■□□□□ 0.86
IRF3-216ENST00000597180 CHMP2AO43633 222 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
IRF3-216ENST00000597180 FPGSQ05932 587 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 BFSP2Q13515 415 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 PDXDC2PQ6P474 469 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 MIER3Q7Z3K6 550 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 TMEM199Q8N511 208 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 CCDC155Q8N6L0 562 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 TNPO1Q92973 898 aaKnown RBP20.42■□□□□ 0.86
IRF3-216ENST00000597180 MTMR9Q96QG7 549 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 GABBR1Q9UBS5 961 aa20.42■□□□□ 0.86
IRF3-216ENST00000597180 NOL7Q9UMY1 257 aaKnown RBP20.42■□□□□ 0.86
IRF3-216ENST00000597180 A0A1W2PPC1 479 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 POTEB3A0JP26 581 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 TREHO43280 583 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 INSRRP14616 1297 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 ATP4AP20648 1035 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 PDCP20941 246 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 GRIK4Q16099 956 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 CALCRLQ16602 461 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 TRIM71Q2Q1W2 868 aaKnown RBP20.41■□□□□ 0.86
IRF3-216ENST00000597180 TTC38Q5R3I4 469 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 MCTP1Q6DN14 999 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 POTEBQ6S5H4 581 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 ATP8B4Q8TF62 1192 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 UBE2OQ9C0C9 1292 aaKnown RBP20.41■□□□□ 0.86
IRF3-216ENST00000597180 TRPC6Q9Y210 931 aa20.41■□□□□ 0.86
IRF3-216ENST00000597180 MBLAC1A4D2B0 266 aaPredicted RBP20.4■□□□□ 0.86
IRF3-216ENST00000597180 RRN3P2A6NIE6 340 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 MARCH6O60337 910 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 HBP1O60381 514 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 SIP14410 1827 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 ATP2B1P20020 1258 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 MCM7P33993 719 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 TOB1P50616 345 aaPredicted RBP20.4■□□□□ 0.86
IRF3-216ENST00000597180 SPIRE1Q08AE8 756 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 MARCH8Q5T0T0 291 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 WNT8BQ93098 351 aa20.4■□□□□ 0.86
IRF3-216ENST00000597180 TET1Q8NFU7 2136 aa20.39■□□□□ 0.86
IRF3-216ENST00000597180 COL1A2P08123 1366 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 EML1O00423 815 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 IQCF3P0C7M6 154 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 CSF2RAP15509 400 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 CCL23P55773 120 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 PPIGQ13427 754 aaKnown RBP eCLIP20.39■□□□□ 0.853e-8■■■■□ 21.5
IRF3-216ENST00000597180 RETREG2Q8NC44 543 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 BBXQ8WY36 941 aaPredicted RBP20.39■□□□□ 0.85
IRF3-216ENST00000597180 TMEM60Q9H2L4 133 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 TUBE1Q9UJT0 475 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 TRIOBPQ9H2D6 2365 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 LOXHD1Q8IVV2 1947 aa20.39■□□□□ 0.85
IRF3-216ENST00000597180 ZNF862O60290 1169 aa20.38■□□□□ 0.85
IRF3-216ENST00000597180 CKBP12277 381 aa20.38■□□□□ 0.85
IRF3-216ENST00000597180 SELPP16109 830 aa20.38■□□□□ 0.85
IRF3-216ENST00000597180 EPHB4P54760 987 aa20.38■□□□□ 0.85
IRF3-216ENST00000597180 ZNF174Q15697 407 aa20.38■□□□□ 0.85
IRF3-216ENST00000597180 UGCGQ16739 394 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms