RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 TTC38Q5R3I4 469 aa10.71□□□□□ -0.69
TRIM28-208ENST00000597172 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
TRIM28-208ENST00000597172 C4orf32Q8N8J7 132 aa10.71□□□□□ -0.69
TRIM28-208ENST00000597172 FAM133AQ8N9E0 248 aa10.71□□□□□ -0.69
TRIM28-208ENST00000597172 KLHDC9Q8NEP7 349 aa10.71□□□□□ -0.69
TRIM28-208ENST00000597172 ZNF396Q96N95 335 aaPredicted RBP10.71□□□□□ -0.69
TRIM28-208ENST00000597172 GDPD2Q9HCC8 539 aa10.71□□□□□ -0.69
TRIM28-208ENST00000597172 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
TRIM28-208ENST00000597172 PRKAG3Q9UGI9 489 aa10.71□□□□□ -0.69
TRIM28-208ENST00000597172 FRMPD4Q14CM0 1322 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 FLNBO75369 2602 aaKnown RBP10.7□□□□□ -0.7
TRIM28-208ENST00000597172 CYP3A7-CYP3A51PA0A087WV96 503 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 ARHGEF15O94989 841 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 PGK2P07205 417 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 FCER1AP12319 257 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 CYP3A7P24462 503 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 CIITAP33076 1130 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 IRS1P35568 1242 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 CCL23P55773 120 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 KRT85P78386 507 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 ARHGAP4P98171 946 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 SLC39A14Q15043 492 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 HERC4Q5GLZ8 1057 aaPredicted RBP10.7□□□□□ -0.7
TRIM28-208ENST00000597172 NEK8Q86SG6 692 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 FAM126BQ8IXS8 530 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 LINC00301Q8NCQ3 95 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 IL31RAQ8NI17 732 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 CYP2W1Q8TAV3 490 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 LEO1Q8WVC0 666 aaPredicted RBP10.7□□□□□ -0.7
TRIM28-208ENST00000597172 EDAQ92838 391 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 MAML3Q96JK9 1138 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 FGD4Q96M96 766 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 RMDN3Q96TC7 470 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 MMP19Q99542 508 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 HIPK3Q9H422 1215 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 ALG13Q9NP73 1137 aaKnown RBP10.7□□□□□ -0.7
TRIM28-208ENST00000597172 PXMP2Q9NR77 195 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 POLR3EQ9NVU0 708 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 MUTYHQ9UIF7 546 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 CFAP45Q9UL16 551 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 NOL7Q9UMY1 257 aaKnown RBP10.7□□□□□ -0.7
TRIM28-208ENST00000597172 FAM50BQ9Y247 325 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 MRVI1Q9Y6F6 885 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 PLXNA3P51805 1871 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 SETXQ7Z333 2677 aaKnown RBP10.7□□□□□ -0.7
TRIM28-208ENST00000597172 USP24Q9UPU5 2620 aa10.7□□□□□ -0.7
TRIM28-208ENST00000597172 UMODL1Q5DID0 1318 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 A0A0U1RQG5 324 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 PRR23AA6NEV1 266 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 TMEM221A6NGB7 291 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 FAM86B1E9PN63 330 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 M0R296 226 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 CCNT1O60563 726 aaKnown RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 TDP2O95551 362 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 FAM86B2P0C5J1 330 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 EIF2AK2P19525 551 aaKnown RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 MCM7P33993 719 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 PGM5Q15124 567 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 PPP4R3AQ6IN85 833 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 CCSAPQ6IQ19 270 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 VSIG10LQ86VR7 867 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 ADHFE1Q8IWW8 467 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 ABRAQ8N0Z2 381 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 NSUN6Q8TEA1 469 aaKnown RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 LENG1Q96BZ8 264 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 PDCD2LQ9BRP1 358 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 TMEM60Q9H2L4 133 aa10.69□□□□□ -0.7
TRIM28-208ENST00000597172 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
TRIM28-208ENST00000597172 DNAH14Q0VDD8 3507 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 IGLV3-22A0A075B6J6 115 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 H3BQ06 376 aaPredicted RBP10.68□□□□□ -0.7
TRIM28-208ENST00000597172 FIBPO43427 364 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 SLC37A4O43826 429 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 YEATS4O95619 227 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 CD4P01730 458 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 NR3C2P08235 984 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 AKR1A1P14550 325 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
TRIM28-208ENST00000597172 MCM4P33991 863 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 PTGDRQ13258 359 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 COL9A2Q14055 689 aaPredicted RBP10.68□□□□□ -0.7
TRIM28-208ENST00000597172 TTLL4Q14679 1199 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 KCTD2Q14681 263 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 IL17AQ16552 155 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 ZNF792Q3KQV3 632 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 ARHGEF16Q5VV41 709 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 PCNX4Q63HM2 1172 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 MOXD1Q6UVY6 613 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 TRIM67Q6ZTA4 783 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 FBXL6Q8N531 539 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 DNERQ8NFT8 737 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 NEK9Q8TD19 979 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 GDPD5Q8WTR4 605 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 LENG9Q96B70 501 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 SPATA32Q96LK8 384 aa10.68□□□□□ -0.7
TRIM28-208ENST00000597172 GBP4Q96PP9 640 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms