RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 NEK4P51957 841 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 NEDD9Q14511 834 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 EPC2Q52LR7 807 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 HEATR3Q7Z4Q2 680 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 FCHSD1Q86WN1 690 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 NEK9Q8TD19 979 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 SEPT8Q92599 483 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 PHKBQ93100 1093 aa18.25■□□□□ 0.51
USHBP1-206ENST00000596436 ATG2AQ2TAZ0 1938 aa18.24■□□□□ 0.51
USHBP1-206ENST00000596436 H3BNC9 293 aa18.24■□□□□ 0.51
USHBP1-206ENST00000596436 FIBPO43427 364 aa18.24■□□□□ 0.51
USHBP1-206ENST00000596436 LARGE1O95461 756 aa18.24■□□□□ 0.51
USHBP1-206ENST00000596436 SENP7Q9BQF6 1050 aa18.24■□□□□ 0.51
USHBP1-206ENST00000596436 STXBP3O00186 592 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 NOP56O00567 594 aaKnown RBP18.23■□□□□ 0.51
USHBP1-206ENST00000596436 MEIS2O14770 477 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 GNAT1P11488 350 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 IFNAR1P17181 557 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 KCNA5P22460 613 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 SCRN1Q12765 414 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 PKN1Q16512 942 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 PFKFB3Q16875 520 aaPredicted RBP18.23■□□□□ 0.51
USHBP1-206ENST00000596436 XRRA1Q6P2D8 792 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 USP17L6PQ6QN14 398 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 CYFIP1Q7L576 1253 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 RPAINQ86UA6 219 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 APBB2Q92870 758 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 SETD4Q9NVD3 440 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 HCN4Q9Y3Q4 1203 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 TELO2Q9Y4R8 837 aa18.23■□□□□ 0.51
USHBP1-206ENST00000596436 GRXCR2A6NFK2 248 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 PIK3CDO00329 1044 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 PRPF3O43395 683 aaKnown RBP18.22■□□□□ 0.51
USHBP1-206ENST00000596436 DTNBO60941 627 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 LINC00271P0C7V0 271 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 ANKRD1Q15327 319 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 PTPROQ16827 1216 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 TIGD5Q53EQ6 642 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 PCNX4Q63HM2 1172 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 TRIM50Q86XT4 487 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 LMBR1Q8WVP7 490 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
USHBP1-206ENST00000596436 TRIOO75962 3097 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 PFKFB2O60825 505 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 CTSHP09668 335 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 SCG2P13521 617 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 IL9P15248 144 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 NAPAP54920 295 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 UBE2SQ16763 222 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
USHBP1-206ENST00000596436 TMEM192Q8IY95 271 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 GJD3Q8N144 294 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 YME1L1Q96TA2 773 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 RNF26Q9BY78 433 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-206ENST00000596436 PSTPIP2Q9H939 334 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 EHMT1Q9H9B1 1298 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 RC3H2Q9HBD1 1191 aaKnown RBP18.21■□□□□ 0.51
USHBP1-206ENST00000596436 BARHL2Q9NY43 387 aa18.21■□□□□ 0.51
USHBP1-206ENST00000596436 ZNF215Q9UL58 517 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-206ENST00000596436 C5orf42Q9H799 3197 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 C5orf67F2Z3F1 127 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 hCG_1984214I3L0E3 225 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 ADAMTS3O15072 1205 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 GPM6BQ13491 265 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 ME3Q16798 604 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 PTCRAQ6ISU1 281 aaPredicted RBP18.2■□□□□ 0.5
USHBP1-206ENST00000596436 PPP1R18Q6NYC8 613 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 ZNF713Q8N859 430 aaPredicted RBP18.2■□□□□ 0.5
USHBP1-206ENST00000596436 BANK1Q8NDB2 785 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 PABPC5Q96DU9 382 aaKnown RBP18.2■□□□□ 0.5
USHBP1-206ENST00000596436 IFIH1Q9BYX4 1025 aaKnown RBP18.2■□□□□ 0.5
USHBP1-206ENST00000596436 SLKQ9H2G2 1235 aaPredicted RBP18.2■□□□□ 0.5
USHBP1-206ENST00000596436 NRCAMQ92823 1304 aa18.2■□□□□ 0.5
USHBP1-206ENST00000596436 CTDNEP1O95476 244 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 CHRNA1P02708 482 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 MGAT3Q09327 533 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 ST3GAL1Q11201 340 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 TBC1D32Q96NH3 1257 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 BACH2Q9BYV9 841 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 RTEL1Q9NZ71 1219 aa18.19■□□□□ 0.5
USHBP1-206ENST00000596436 FAM86C2PA6NEL3 165 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 PRR33A8MZF0 331 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 CPLX1O14810 134 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 KCNA2P16389 499 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 ADCY7P51828 1080 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 ARHGAP4P98171 946 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 TCEAL5Q5H9L2 206 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 TAF2Q6P1X5 1199 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 GIMAP8Q8ND71 665 aaPredicted RBP18.18■□□□□ 0.5
USHBP1-206ENST00000596436 CUL5Q93034 780 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 GPRASP2Q96D09 838 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 AIFM3Q96NN9 605 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 NSUN3Q9H649 340 aaKnown RBP18.18■□□□□ 0.5
USHBP1-206ENST00000596436 UPF2Q9HAU5 1272 aaKnown RBP18.18■□□□□ 0.5
USHBP1-206ENST00000596436 RIC8AQ9NPQ8 531 aa18.18■□□□□ 0.5
USHBP1-206ENST00000596436 PIEZO1Q92508 2521 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms