RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 WDR64B1ANS9 1081 aa20.62■□□□□ 0.89
ZNF558-204ENST00000596172 PSAPP07602 524 aa20.62■□□□□ 0.89
ZNF558-204ENST00000596172 SERINC5Q86VE9 423 aa20.62■□□□□ 0.89
ZNF558-204ENST00000596172 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
ZNF558-204ENST00000596172 PCDH10Q9P2E7 1040 aa20.62■□□□□ 0.89
ZNF558-204ENST00000596172 MAFBQ9Y5Q3 323 aaPredicted RBP20.62■□□□□ 0.89
ZNF558-204ENST00000596172 DOCK5Q9H7D0 1870 aa20.62■□□□□ 0.89
ZNF558-204ENST00000596172 BACH1O14867 736 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 JAK3P52333 1124 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 ZNF200P98182 395 aaPredicted RBP20.61■□□□□ 0.89
ZNF558-204ENST00000596172 PPIGQ13427 754 aaKnown RBP eCLIP20.61■□□□□ 0.89
ZNF558-204ENST00000596172 SWSAP1Q6NVH7 229 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 NOSTRINQ8IVI9 506 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 CCDC60Q8IWA6 550 aaPredicted RBP20.61■□□□□ 0.89
ZNF558-204ENST00000596172 RETREG2Q8NC44 543 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 DHX38Q92620 1227 aaKnown RBP20.61■□□□□ 0.89
ZNF558-204ENST00000596172 ATP6V0A1Q93050 837 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 INTS4Q96HW7 963 aaKnown RBP20.61■□□□□ 0.89
ZNF558-204ENST00000596172 WNT8AQ9H1J5 351 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 ZNF302Q9NR11 478 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 DISC1Q9NRI5 854 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 LTBP2Q14767 1821 aa20.61■□□□□ 0.89
ZNF558-204ENST00000596172 UMODL1Q5DID0 1318 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 RRN3P2A6NIE6 340 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 MARK3P27448 753 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 TRAPPC10P48553 1259 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 PPFIA1Q13136 1202 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 ORC2Q13416 577 aaPredicted RBP20.6■□□□□ 0.89
ZNF558-204ENST00000596172 PLCB4Q15147 1175 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 TRIM71Q2Q1W2 868 aaKnown RBP20.6■□□□□ 0.89
ZNF558-204ENST00000596172 HABP4Q5JVS0 413 aaKnown RBP20.6■□□□□ 0.89
ZNF558-204ENST00000596172 SLFN12Q8IYM2 578 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 TDHQ8IZJ6 230 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 LMBR1Q8WVP7 490 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 HAS1Q92839 578 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 GJA10Q969M2 543 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 UNC45AQ9H3U1 944 aa20.6■□□□□ 0.89
ZNF558-204ENST00000596172 POTEB3A0JP26 581 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 MBLAC1A4D2B0 266 aaPredicted RBP20.59■□□□□ 0.89
ZNF558-204ENST00000596172 K7ELQ4 463 aaPredicted RBP20.59■□□□□ 0.89
ZNF558-204ENST00000596172 TREHO43280 583 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 BAG4O95429 457 aaKnown RBP20.59■□□□□ 0.89
ZNF558-204ENST00000596172 CSF2RAP15509 400 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 RFC2P35250 354 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 PPP2R5CQ13362 524 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 GNL2Q13823 731 aaKnown RBP20.59■□□□□ 0.89
ZNF558-204ENST00000596172 GRIK4Q16099 956 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 PDXDC2PQ6P474 469 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 POTEBQ6S5H4 581 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 ATP8B4Q8TF62 1192 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 SAMM50Q9Y512 469 aa20.59■□□□□ 0.89
ZNF558-204ENST00000596172 HBP1O60381 514 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 CAND2O75155 1236 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 PARNO95453 639 aaKnown RBP20.58■□□□□ 0.89
ZNF558-204ENST00000596172 IQCF3P0C7M6 154 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 INSRRP14616 1297 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 ATP4AP20648 1035 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 EPHB4P54760 987 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 CCL23P55773 120 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 RPAINQ86UA6 219 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 RPUSD2Q8IZ73 545 aaKnown RBP20.58■□□□□ 0.89
ZNF558-204ENST00000596172 IL23AQ9NPF7 189 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 VAV3Q9UKW4 847 aa20.58■□□□□ 0.89
ZNF558-204ENST00000596172 KIF28PB7ZC32 967 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 WNT7AO00755 349 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 MARCH6O60337 910 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 NEMFO60524 1076 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 CKBP12277 381 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 SELPP16109 830 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 MARCH8Q5T0T0 291 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 LARP1BQ659C4 914 aaKnown RBP20.57■□□□□ 0.88
ZNF558-204ENST00000596172 TAF2Q6P1X5 1199 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 C16orf59Q7L2K0 433 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 MIER3Q7Z3K6 550 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 BBXQ8WY36 941 aaPredicted RBP20.57■□□□□ 0.88
ZNF558-204ENST00000596172 MTMR9Q96QG7 549 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 GABBR1Q9UBS5 961 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 TRPC6Q9Y210 931 aa20.57■□□□□ 0.88
ZNF558-204ENST00000596172 IGSF9BQ9UPX0 1349 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 H3BQV1 296 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 CHMP2AO43633 222 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 PFKMP08237 780 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 CALCRLQ16602 461 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 ZNF484Q5JVG2 852 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 WNT8BQ93098 351 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 VWCEQ96DN2 955 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 SCLYQ96I15 445 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 FAM167AQ96KS9 214 aa20.56■□□□□ 0.88
ZNF558-204ENST00000596172 NOL7Q9UMY1 257 aaKnown RBP20.56■□□□□ 0.88
ZNF558-204ENST00000596172 RPLP2P05387 115 aaKnown RBP20.55■□□□□ 0.88
ZNF558-204ENST00000596172 PDCP20941 246 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 SHHQ15465 462 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 LRIT3Q3SXY7 679 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 TMEM240Q5SV17 173 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 PSRC1Q6PGN9 363 aaPredicted RBP20.55■□□□□ 0.88
ZNF558-204ENST00000596172 TRAF7Q6Q0C0 670 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 LRRC8DQ7L1W4 858 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 TUBE1Q9UJT0 475 aa20.55■□□□□ 0.88
ZNF558-204ENST00000596172 PCDHA12Q9UN75 941 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms