RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
CAPN12-202ENST00000593700 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 ARMCX2Q7L311 632 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 TRIML1Q8N9V2 468 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 RAET1EQ8TD07 263 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 UIMC1Q96RL1 719 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 EIF2AK1Q9BQI3 630 aaKnown RBP16.39■□□□□ 0.21
CAPN12-202ENST00000593700 MCOLN1Q9GZU1 580 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 JPH1Q9HDC5 661 aaPredicted RBP16.39■□□□□ 0.21
CAPN12-202ENST00000593700 VTA1Q9NP79 307 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 ANO10Q9NW15 660 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 RMND1Q9NWS8 449 aa16.39■□□□□ 0.21
CAPN12-202ENST00000593700 ZSWIM8A7E2V4 1837 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 POTEB3A0JP26 581 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 GOLGA6L3A6NEY3 463 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
CAPN12-202ENST00000593700 KCNA2P16389 499 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 RGS2P41220 211 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 AFMP43652 599 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 TYRO3Q06418 890 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 MAP2K5Q13163 448 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
CAPN12-202ENST00000593700 PNOCQ13519 176 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 POTEBQ6S5H4 581 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 TNS4Q8IZW8 715 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 SLAIN1Q8ND83 568 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 RAD54LQ92698 747 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 PAGE5Q96GU1 130 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 FGD4Q96M96 766 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
CAPN12-202ENST00000593700 PLIN2Q99541 437 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 GTPBP4Q9BZE4 634 aaKnown RBP16.38■□□□□ 0.21
CAPN12-202ENST00000593700 ARHGAP39Q9C0H5 1083 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 NAT10Q9H0A0 1025 aaKnown RBP16.38■□□□□ 0.21
CAPN12-202ENST00000593700 SLC9A2Q9UBY0 812 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 DACH1Q9UI36 760 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
CAPN12-202ENST00000593700 MLLT3P42568 568 aaPredicted RBP16.37■□□□□ 0.21
CAPN12-202ENST00000593700 TTLL4Q14679 1199 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 NAALADL2Q58DX5 795 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 MAMDC4Q6UXC1 1216 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 SH3RF1Q7Z6J0 888 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 SCFD2Q8WU76 684 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 PNMA5Q96PV4 448 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 GSDMAQ96QA5 445 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 APBA2Q99767 749 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 KBTBD4Q9NVX7 518 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 TUBE1Q9UJT0 475 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 KIAA1024Q9UPX6 916 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 DNM3Q9UQ16 869 aa16.37■□□□□ 0.21
CAPN12-202ENST00000593700 POTEFA5A3E0 1075 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 EML1O00423 815 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
CAPN12-202ENST00000593700 COBLO75128 1261 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 MED24O75448 989 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 RGS20O76081 388 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 P4HBP07237 508 aaKnown RBP16.36■□□□□ 0.21
CAPN12-202ENST00000593700 PSAPP07602 524 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 CYP4A11Q02928 519 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 PRKCZQ05513 592 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 MORN1Q5T089 497 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 POTEGQ6S5H5 508 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 CATSPER3Q86XQ3 398 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 MAML3Q96JK9 1138 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 LXNQ9BS40 222 aa16.36■□□□□ 0.21
CAPN12-202ENST00000593700 DPYSL4O14531 572 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 ZMYND10O75800 440 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 HOXC6P09630 235 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 CAPN2P17655 700 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 UBA1P22314 1058 aaKnown RBP16.35■□□□□ 0.21
CAPN12-202ENST00000593700 CTGFP29279 349 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 QARSP47897 775 aaKnown RBP16.35■□□□□ 0.21
CAPN12-202ENST00000593700 FLT3LGP49771 235 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 NLRP12P59046 1061 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 DPYDQ12882 1025 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 SLC9C1Q4G0N8 1177 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 NT5DC1Q5TFE4 455 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 EEPD1Q7L9B9 569 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 TPH2Q8IWU9 490 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 FBXO16Q8IX29 292 aaPredicted RBP16.35■□□□□ 0.21
CAPN12-202ENST00000593700 DYDC2Q96IM9 177 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 NACC1Q96RE7 527 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 FUCA2Q9BTY2 467 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 ABHD16BQ9H3Z7 469 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 ZSWIM4Q9H7M6 989 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.35■□□□□ 0.21
CAPN12-202ENST00000593700 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 PCDHA5Q9Y5H7 936 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 PCDHA10Q9Y5I2 948 aa16.35■□□□□ 0.21
CAPN12-202ENST00000593700 ADCY3O60266 1144 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 ATP9AO75110 1047 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 SSBP05455 408 aaKnown RBP eCLIP16.34■□□□□ 0.21
CAPN12-202ENST00000593700 GRK4P32298 578 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 PSMC5P62195 406 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 ASIC1P78348 528 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms