RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GLG1Q92896 1179 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 PCYT2Q99447 389 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 HCN4Q9Y3Q4 1203 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 CDY2AQ9Y6F7 541 aa18.76■□□□□ 0.59
LIG1-205ENST00000593425 TTC3P53804 2025 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 C5orf67F2Z3F1 127 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 ENPP3O14638 875 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 CALM1P0DP23 149 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 CALM2P0DP24 149 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 CALM3P0DP25 149 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 SSTR3P32745 418 aaPredicted RBP18.75■□□□□ 0.59
LIG1-205ENST00000593425 CREB3L3Q68CJ9 461 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 EP400NLQ6ZTU2 488 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 HEATR3Q7Z4Q2 680 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 RSPH3Q86UC2 560 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 SMARCAD1Q9H4L7 1026 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 SLC12A7Q9Y666 1083 aa18.75■□□□□ 0.59
LIG1-205ENST00000593425 GRM6O15303 877 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 BMPR1AP36894 532 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 MRPS6P82932 125 aaKnown RBP18.74■□□□□ 0.59
LIG1-205ENST00000593425 NECTIN1Q15223 517 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 TSHZ1Q6ZSZ6 1077 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 FANCBQ8NB91 859 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 ZNF689Q96CS4 500 aaPredicted RBP18.74■□□□□ 0.59
LIG1-205ENST00000593425 PGBD1Q96JS3 809 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 ESYT1Q9BSJ8 1104 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 FAM49AQ9H0Q0 323 aaPredicted RBP18.74■□□□□ 0.59
LIG1-205ENST00000593425 AGO3Q9H9G7 860 aaKnown RBP18.74■□□□□ 0.59
LIG1-205ENST00000593425 CLDND1Q9NY35 253 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 CNTNAP5Q8WYK1 1306 aa18.74■□□□□ 0.59
LIG1-205ENST00000593425 INSRRP14616 1297 aa18.73■□□□□ 0.59
LIG1-205ENST00000593425 LTBRP36941 435 aa18.73■□□□□ 0.59
LIG1-205ENST00000593425 PUS10Q3MIT2 529 aaKnown RBP18.73■□□□□ 0.59
LIG1-205ENST00000593425 WWC2Q6AWC2 1192 aa18.73■□□□□ 0.59
LIG1-205ENST00000593425 TYW1BQ6NUM6 668 aa18.73■□□□□ 0.59
LIG1-205ENST00000593425 SGMS1Q86VZ5 419 aa18.73■□□□□ 0.59
LIG1-205ENST00000593425 CYP2W1Q8TAV3 490 aa18.73■□□□□ 0.59
LIG1-205ENST00000593425 TRAPPC12Q8WVT3 735 aa18.73■□□□□ 0.59
LIG1-205ENST00000593425 C11orf84Q9BUA3 381 aaPredicted RBP18.73■□□□□ 0.59
LIG1-205ENST00000593425 JPH1Q9HDC5 661 aaPredicted RBP18.73■□□□□ 0.59
LIG1-205ENST00000593425 MAFGO15525 162 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 CSPG5O95196 566 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 RB1P06400 928 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 CD52P31358 61 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 TMEM62Q0P6H9 643 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 BTG3Q14201 252 aaPredicted RBP18.72■□□□□ 0.59
LIG1-205ENST00000593425 CLP1Q92989 425 aaKnown RBP18.72■□□□□ 0.59
LIG1-205ENST00000593425 MXRA8Q9BRK3 442 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 LMAN2LQ9H0V9 348 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 KCNH7Q9NS40 1196 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 SLC9A2Q9UBY0 812 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 RWDD3Q9Y3V2 267 aa18.72■□□□□ 0.59
LIG1-205ENST00000593425 ARIH1Q9Y4X5 557 aaPredicted RBP18.72■□□□□ 0.59
LIG1-205ENST00000593425 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 DGKIO75912 1065 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 HYAL1Q12794 435 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 PLCB4Q15147 1175 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 RTN4RL1Q86UN2 441 aaPredicted RBP18.71■□□□□ 0.59
LIG1-205ENST00000593425 ANO2Q9NQ90 1003 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 TRPC6Q9Y210 931 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 TRPV2Q9Y5S1 764 aa18.71■□□□□ 0.59
LIG1-205ENST00000593425 RRN3P2A6NIE6 340 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 ARP10275 920 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
LIG1-205ENST00000593425 GTF2F1P35269 517 aaKnown RBP eCLIP18.7■□□□□ 0.58
LIG1-205ENST00000593425 ACTR2P61160 394 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 ZP2Q05996 745 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 DLX2Q07687 328 aaPredicted RBP18.7■□□□□ 0.58
LIG1-205ENST00000593425 ITGB3BPQ13352 177 aaPredicted RBP18.7■□□□□ 0.58
LIG1-205ENST00000593425 CTC1Q2NKJ3 1217 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 CRIPAKQ8N1N5 446 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 AZI2Q9H6S1 392 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 MRPL42Q9Y6G3 142 aaKnown RBP18.7■□□□□ 0.58
LIG1-205ENST00000593425 NFASCO94856 1347 aa18.7■□□□□ 0.58
LIG1-205ENST00000593425 MYO7AQ13402 2215 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 PRR33A8MZF0 331 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 MMP1P03956 469 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 NAPAP54920 295 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 FUT2Q10981 343 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 CAMK1Q14012 370 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 CLUL1Q15846 466 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 IER5Q5VY09 327 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 TCEANC2Q96MN5 208 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 SDF4Q9BRK5 362 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 ANO3Q9BYT9 981 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 ALG13Q9NP73 1137 aaKnown RBP18.69■□□□□ 0.58
LIG1-205ENST00000593425 RIC8AQ9NPQ8 531 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 PADI3Q9ULW8 664 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 SQORQ9Y6N5 450 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 IGSF9BQ9UPX0 1349 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 PLXNA4Q9HCM2 1894 aa18.69■□□□□ 0.58
LIG1-205ENST00000593425 TBX10O75333 385 aa18.68■□□□□ 0.58
LIG1-205ENST00000593425 RPLP2P05387 115 aaKnown RBP18.68■□□□□ 0.58
LIG1-205ENST00000593425 STAT5BP51692 787 aa18.68■□□□□ 0.58
LIG1-205ENST00000593425 AGO4Q9HCK5 861 aaKnown RBP18.68■□□□□ 0.58
LIG1-205ENST00000593425 TMEM260Q9NX78 707 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms