RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 RBAK-RBAKDNI3L0D1 243 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 hCG_1984214I3L0E3 225 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 NEFLP07196 543 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 ITGB5P18084 799 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 HTRA4P83105 476 aaPredicted RBP15.12■□□□□ 0.01
H3F3B-213ENST00000593254 FGD1P98174 961 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 ZNF200P98182 395 aaPredicted RBP15.12■□□□□ 0.01
H3F3B-213ENST00000593254 IKBKEQ14164 716 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 MBTPS1Q14703 1052 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 TRIM71Q2Q1W2 868 aaKnown RBP15.12■□□□□ 0.01
H3F3B-213ENST00000593254 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 Q6ZUG5 572 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 FBXL16Q8N461 479 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 ZNF713Q8N859 430 aaPredicted RBP15.12■□□□□ 0.01
H3F3B-213ENST00000593254 GIMAP8Q8ND71 665 aaPredicted RBP15.12■□□□□ 0.01
H3F3B-213ENST00000593254 WNT8BQ93098 351 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 CDHR1Q96JP9 859 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 RIC8AQ9NPQ8 531 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 PRKAG3Q9UGI9 489 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 PCDHA6Q9UN73 950 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 PCDHA8Q9Y5H6 950 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 UBIAD1Q9Y5Z9 338 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 V9GY48 417 aaPredicted RBP15.12■□□□□ 0.01
H3F3B-213ENST00000593254 SPTBN4Q9H254 2564 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 STXBP3O00186 592 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 EPB41L2O43491 1005 aaKnown RBP15.11■□□□□ 0.01
H3F3B-213ENST00000593254 ATP9AO75110 1047 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 KCNA2P16389 499 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 METAP2P50579 478 aaKnown RBP eCLIP15.11■□□□□ 0.014e-7■■■□□ 15.1
H3F3B-213ENST00000593254 NAPAP54920 295 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 APOBRQ0VD83 1088 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 TIGD5Q53EQ6 642 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 FAM117BQ6P1L5 589 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 HFE2Q6ZVN8 426 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 SERINC5Q86VE9 423 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 BRF1Q92994 677 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 PABPC5Q96DU9 382 aaKnown RBP15.11■□□□□ 0.01
H3F3B-213ENST00000593254 AGXT2Q9BYV1 514 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 BARHL2Q9NY43 387 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 TELO2Q9Y4R8 837 aa15.11■□□□□ 0.01
H3F3B-213ENST00000593254 COL4A6Q14031 1691 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 CCDC196A0A1B0GTZ2 297 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 SMIM10L2AP0DMW4 78 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 SMIM10L2BP0DMW5 78 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 RPS6KB1P23443 525 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 ADD1P35611 737 aaKnown RBP15.1■□□□□ 0.01
H3F3B-213ENST00000593254 ADCY7P51828 1080 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 MTMR1Q13613 665 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 PTPROQ16827 1216 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 EPC2Q52LR7 807 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 ZNF618Q5T7W0 954 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.1■□□□□ 0.016e-15■■■■□ 25.7
H3F3B-213ENST00000593254 TRIM50Q86XT4 487 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 EHMT1Q9H9B1 1298 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
H3F3B-213ENST00000593254 NAP1L2Q9ULW6 460 aaPredicted RBP15.1■□□□□ 0.01
H3F3B-213ENST00000593254 ZFHX2Q9C0A1 2572 aaPredicted RBP15.09■□□□□ 0.01
H3F3B-213ENST00000593254 C17orf102A2RUQ5 167 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 H3BNC9 293 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 MAFGO15525 162 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 LGR5O75473 907 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 FOSP01100 380 aaPredicted RBP15.09■□□□□ 0.01
H3F3B-213ENST00000593254 PSMA5P28066 241 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 SP4Q02446 784 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 PFKFB3Q16875 520 aaPredicted RBP15.09■□□□□ 0.01
H3F3B-213ENST00000593254 ADHFE1Q8IWW8 467 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 BANK1Q8NDB2 785 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 ATP6V0A1Q93050 837 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 SAMD11Q96NU1 681 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 GLT8D2Q9H1C3 349 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 RNPEPQ9H4A4 650 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 ZNF215Q9UL58 517 aaPredicted RBP15.09■□□□□ 0.01
H3F3B-213ENST00000593254 FAM50BQ9Y247 325 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 RALGAPA2Q2PPJ7 1873 aa15.09■□□□□ 0.01
H3F3B-213ENST00000593254 SMCO2A6NFE2 343 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 TREHO43280 583 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 TCF7P36402 384 aaPredicted RBP15.08■□□□□ 0
H3F3B-213ENST00000593254 CLK2P49760 499 aaKnown RBP15.08■□□□□ 0
H3F3B-213ENST00000593254 AP3B2Q13367 1082 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 TCEAL5Q5H9L2 206 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 UTP14CQ5TAP6 766 aaKnown RBP15.08■□□□□ 0
H3F3B-213ENST00000593254 PGBD1Q96JS3 809 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 MXRA8Q9BRK3 442 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 ANO3Q9BYT9 981 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 EMSYQ7Z589 1322 aa15.08■□□□□ 0
H3F3B-213ENST00000593254 AMHP03971 560 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 GNAT1P11488 350 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 SCG2P13521 617 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 IRS1P35568 1242 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 LTBRP36941 435 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 SREBF1P36956 1147 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 EVCP57679 992 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 ADAM17P78536 824 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 MYOCDQ8IZQ8 938 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 DBF4BQ8NFT6 615 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 CYP2W1Q8TAV3 490 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 SEPT1Q8WYJ6 367 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 MFSD14AQ96MC6 490 aa15.07■□□□□ 0
H3F3B-213ENST00000593254 NSUN3Q9H649 340 aaKnown RBP15.07■□□□□ 0
H3F3B-213ENST00000593254 KCNH7Q9NS40 1196 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms