RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 UBE2ZQ9H832 354 aaPredicted RBP23.4■■□□□ 1.34
TRIM47-207ENST00000593089 COL4A6Q14031 1691 aa23.39■■□□□ 1.34
TRIM47-207ENST00000593089 KLF18A0A0U1RQI7 1052 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 MBLAC1A4D2B0 266 aaPredicted RBP23.39■■□□□ 1.33
TRIM47-207ENST00000593089 STXBP3O00186 592 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 CDC45O75419 566 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 ARP10275 920 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 INSRRP14616 1297 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 TMEM192Q8IY95 271 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 SDF4Q9BRK5 362 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 ANO3Q9BYT9 981 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 TMEM260Q9NX78 707 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 NAP1L2Q9ULW6 460 aaPredicted RBP23.39■■□□□ 1.33
TRIM47-207ENST00000593089 TRPC6Q9Y210 931 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 CDY2AQ9Y6F7 541 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 RALGAPA2Q2PPJ7 1873 aa23.39■■□□□ 1.33
TRIM47-207ENST00000593089 SMCO2A6NFE2 343 aa23.38■■□□□ 1.33
TRIM47-207ENST00000593089 FOSP01100 380 aaPredicted RBP23.38■■□□□ 1.33
TRIM47-207ENST00000593089 GPM6BQ13491 265 aa23.38■■□□□ 1.33
TRIM47-207ENST00000593089 PTPROQ16827 1216 aa23.38■■□□□ 1.33
TRIM47-207ENST00000593089 TSGA10IPQ3SY00 556 aa23.38■■□□□ 1.33
TRIM47-207ENST00000593089 FBXO47Q5MNV8 452 aa23.38■■□□□ 1.33
TRIM47-207ENST00000593089 MRPL38Q96DV4 380 aaKnown RBP23.38■■□□□ 1.33
TRIM47-207ENST00000593089 FAM49AQ9H0Q0 323 aaPredicted RBP23.38■■□□□ 1.33
TRIM47-207ENST00000593089 NFASCO94856 1347 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 BRWD1Q9NSI6 2320 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 RRN3P2A6NIE6 340 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 H3BNC9 293 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 hCG_1984214I3L0E3 225 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 CDC27P30260 824 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 ACTR2P61160 394 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 MRPS6P82932 125 aaKnown RBP23.37■■□□□ 1.33
TRIM47-207ENST00000593089 KRT32Q14532 448 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 CEP55Q53EZ4 464 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 ZNF713Q8N859 430 aaPredicted RBP23.37■■□□□ 1.33
TRIM47-207ENST00000593089 IL17RAQ96F46 866 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 BARHL2Q9NY43 387 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 BDP1A6H8Y1 2624 aa23.37■■□□□ 1.33
TRIM47-207ENST00000593089 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.36■■□□□ 1.33
TRIM47-207ENST00000593089 KCNA5P22460 613 aa23.36■■□□□ 1.33
TRIM47-207ENST00000593089 ITGB3BPQ13352 177 aaPredicted RBP23.36■■□□□ 1.33
TRIM47-207ENST00000593089 PLCB4Q15147 1175 aa23.36■■□□□ 1.33
TRIM47-207ENST00000593089 FIBCD1Q8N539 461 aa23.36■■□□□ 1.33
TRIM47-207ENST00000593089 TRAPPC12Q8WVT3 735 aa23.36■■□□□ 1.33
TRIM47-207ENST00000593089 AGO4Q9HCK5 861 aaKnown RBP23.36■■□□□ 1.33
TRIM47-207ENST00000593089 FAM217BQ9NTX9 383 aaPredicted RBP23.36■■□□□ 1.33
TRIM47-207ENST00000593089 RAPGEFL1Q9UHV5 662 aa23.36■■□□□ 1.33
TRIM47-207ENST00000593089 ENPP3O14638 875 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 CPA1P15085 419 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 ZNF76P36508 570 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 STAT5BP51692 787 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 FGD1P98174 961 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 TMEM62Q0P6H9 643 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 AP3B2Q13367 1082 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 TSHZ1Q6ZSZ6 1077 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 TNPO1Q92973 898 aaKnown RBP23.35■■□□□ 1.33
TRIM47-207ENST00000593089 LOXHD1Q8IVV2 1947 aa23.35■■□□□ 1.33
TRIM47-207ENST00000593089 DDX39AO00148 427 aaKnown RBP23.34■■□□□ 1.33
TRIM47-207ENST00000593089 HMGB1P09429 215 aaKnown RBP23.34■■□□□ 1.33
TRIM47-207ENST00000593089 CD52P31358 61 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 CTNNB1P35222 781 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 SREBF1P36956 1147 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 CLK2P49760 499 aaKnown RBP23.34■■□□□ 1.33
TRIM47-207ENST00000593089 TIGD5Q53EQ6 642 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 IER5Q5VY09 327 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 PLPPR4Q7Z2D5 763 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 TEX2Q8IWB9 1127 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 GLT8D2Q9H1C3 349 aa23.34■■□□□ 1.33
TRIM47-207ENST00000593089 AGO3Q9H9G7 860 aaKnown RBP23.34■■□□□ 1.33
TRIM47-207ENST00000593089 ADGRA3Q8IWK6 1321 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 M0QZ92 97 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 MEIS1O00470 390 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 RPLP2P05387 115 aaKnown RBP23.33■■□□□ 1.33
TRIM47-207ENST00000593089 ADD1P35611 737 aaKnown RBP23.33■■□□□ 1.33
TRIM47-207ENST00000593089 METAP2P50579 478 aaKnown RBP eCLIP23.33■■□□□ 1.33
TRIM47-207ENST00000593089 APOBRQ0VD83 1088 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 LEXMQ3ZCV2 418 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 JAKMIP3Q5VZ66 844 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 BANK1Q8NDB2 785 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 C1QTNF1Q9BXJ1 281 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 TRPV2Q9Y5S1 764 aa23.33■■□□□ 1.33
TRIM47-207ENST00000593089 POTEB3A0JP26 581 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 RCAN1P53805 252 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 PFKFB3Q16875 520 aaPredicted RBP23.32■■□□□ 1.32
TRIM47-207ENST00000593089 TCEAL5Q5H9L2 206 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 POTEBQ6S5H4 581 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 Q6ZUG5 572 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.32■■□□□ 1.32
TRIM47-207ENST00000593089 UIMC1Q96RL1 719 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 EPHX3Q9H6B9 360 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 PCDHA2Q9Y5H9 948 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 TTC3P53804 2025 aa23.32■■□□□ 1.32
TRIM47-207ENST00000593089 BACH1O14867 736 aa23.31■■□□□ 1.32
TRIM47-207ENST00000593089 ATG7O95352 703 aa23.31■■□□□ 1.32
TRIM47-207ENST00000593089 CCNE2O96020 404 aa23.31■■□□□ 1.32
TRIM47-207ENST00000593089 BTG3Q14201 252 aaPredicted RBP23.31■■□□□ 1.32
TRIM47-207ENST00000593089 EP400NLQ6ZTU2 488 aa23.31■■□□□ 1.32
TRIM47-207ENST00000593089 PLA2G4DQ86XP0 818 aa23.31■■□□□ 1.32
TRIM47-207ENST00000593089 LINC01599Q8WXQ3 324 aa23.31■■□□□ 1.32
TRIM47-207ENST00000593089 JAKMIP1Q96N16 626 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms