RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 AFAP1L1Q8TED9 768 aa16.82■□□□□ 0.28
DDX39A-221ENST00000593026 HDAC6Q9UBN7 1215 aa16.82■□□□□ 0.28
DDX39A-221ENST00000593026 LAD1O00515 517 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 SMIM10L2AP0DMW4 78 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 SMIM10L2BP0DMW5 78 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-221ENST00000593026 SPIRE1Q08AE8 756 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 PTGDRQ13258 359 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 PDXDC2PQ6P474 469 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 RNPEPQ9H4A4 650 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 GABBR1Q9UBS5 961 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 GTF2IRD1Q9UHL9 959 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 NR2E3Q9Y5X4 410 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 DNAH12Q6ZR08 3092 aa16.81■□□□□ 0.28
DDX39A-221ENST00000593026 IGSF9BQ9UPX0 1349 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 EML1O00423 815 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 B4GALT4O60513 344 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 CD4P01730 458 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 CLTBP09497 229 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 FOXD4L5Q5VV16 416 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-221ENST00000593026 CKAP2LQ8IYA6 745 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 C4orf32Q8N8J7 132 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 FOXD4L4Q8WXT5 416 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-221ENST00000593026 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
DDX39A-221ENST00000593026 ATP6V0A1Q93050 837 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 TRMT13Q9NUP7 481 aaKnown RBP16.8■□□□□ 0.28
DDX39A-221ENST00000593026 TRPC6Q9Y210 931 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 NOD1Q9Y239 953 aa16.8■□□□□ 0.28
DDX39A-221ENST00000593026 MAFBQ9Y5Q3 323 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-221ENST00000593026 C17orf102A2RUQ5 167 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 BMP15O95972 392 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-221ENST00000593026 FAAP100Q0VG06 881 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 PKP1Q13835 747 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 PLCB4Q15147 1175 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 GDF6Q6KF10 455 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-221ENST00000593026 FAM173BQ6P4H8 233 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 PRDM5Q9NQX1 630 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-221ENST00000593026 PDLIM7Q9NR12 457 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-221ENST00000593026 PRKAG2Q9UGJ0 569 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
DDX39A-221ENST00000593026 NRCAMQ92823 1304 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 POTEB3A0JP26 581 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 POTEMA6NI47 508 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 F13A1P00488 732 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 GNAT1P11488 350 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 PRPHP41219 470 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 TECP42680 631 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 PPFIA1Q13136 1202 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 EPHA7Q15375 998 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 PTGISQ16647 500 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 UGCGQ16739 394 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 POTEBQ6S5H4 581 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 ATP8B4Q8TF62 1192 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 FAM167AQ96KS9 214 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 TMEM39AQ9NV64 488 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 SETD4Q9NVD3 440 aa16.78■□□□□ 0.28
DDX39A-221ENST00000593026 MYH9P35579 1960 aaKnown RBP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 WDR81Q562E7 1941 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 ZNF862O60290 1169 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 HBP1O60381 514 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 SYN1P17600 705 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 ATP4AP20648 1035 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 HOXC8P31273 242 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 QARSP47897 775 aaKnown RBP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 FXR2P51116 673 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 PSMC5P62195 406 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 ZNF200P98182 395 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 PRKCEQ02156 737 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 GRIK4Q16099 956 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 DTHD1Q6ZMT9 781 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 TRMT1LQ7Z2T5 733 aaKnown RBP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 BANK1Q8NDB2 785 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 LMBR1Q8WVP7 490 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 RAB34Q9BZG1 259 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 TBX21Q9UL17 535 aa16.77■□□□□ 0.28
DDX39A-221ENST00000593026 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-221ENST00000593026 RRN3P2A6NIE6 340 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 DKC1O60832 514 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDX39A-221ENST00000593026 OATP04181 439 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 P4HBP07237 508 aaKnown RBP16.76■□□□□ 0.27
DDX39A-221ENST00000593026 CYP2C9P11712 490 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 INSRRP14616 1297 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 IGBP1P78318 339 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 CYP4A11Q02928 519 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 HIC1Q14526 733 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 ARL6IP4Q66PJ3 421 aaKnown RBP16.76■□□□□ 0.27
DDX39A-221ENST00000593026 ERMNQ8TAM6 284 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 NEK9Q8TD19 979 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 DYDC2Q96IM9 177 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 ZNF396Q96N95 335 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-221ENST00000593026 EIF2AK1Q9BQI3 630 aaKnown RBP16.76■□□□□ 0.27
DDX39A-221ENST00000593026 LXNQ9BS40 222 aa16.76■□□□□ 0.27
DDX39A-221ENST00000593026 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms