RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 POLR2MP0CAP2 368 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 POLR2FP61218 127 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 GPIHBP1Q8IV16 184 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 CHURC1Q8WUH1 139 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 BHMT2Q9H2M3 363 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 IGLV3-22A0A075B6J6 115 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 MOCS3O95396 460 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 GPS2Q13227 327 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 CCDC174Q6PII3 467 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 FRMD5Q7Z6J6 570 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 CRACR2AQ9BSW2 395 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 RANBP17Q9H2T7 1088 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 TUFT1Q9NNX1 390 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 LUC7LQ9NQ29 371 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 SNX12Q9UMY4 172 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 CAPN6Q9Y6Q1 641 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 RBAK-RBAKDNI3L0D1 243 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 EML1O00423 815 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 PDXKO00764 312 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 RAD17O75943 681 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 GFPT1Q06210 699 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 KCNH2Q12809 1159 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 BMT2Q1RMZ1 405 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 RUSC1Q9BVN2 902 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 ARMCX3Q9UH62 379 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 L1RE1Q9UN81 338 aa18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 MRPL11Q9Y3B7 192 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-217ENST00000592741 POLR3GO15318 223 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 EIF3JO75822 258 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 MYBP10242 640 aa18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 GAP43P17677 238 aa18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 RXRBP28702 533 aa18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 MSL3Q8N5Y2 521 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 WDR18Q9BV38 432 aa18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 CNTNAP1P78357 1384 aa18.24■□□□□ 0.51
PRKCSH-217ENST00000592741 TARSL2A2RTX5 802 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 PRPF6O94906 941 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 PRLRP16471 622 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 LRCH2Q5VUJ6 765 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 FAM160B2Q86V87 743 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 LARGE2Q8N3Y3 721 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 TTLL6Q8N841 843 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 GMLQ99445 158 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 PSMD1Q99460 953 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 GANQ9H2C0 597 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 VEZTQ9HBM0 779 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 RGL1Q9NZL6 768 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 RSPH10B2B2RC85 870 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 ZNF185O15231 689 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 TLR2O60603 784 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 PLA2G6O60733 806 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 AFPP02771 609 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 RSPH10BP0C881 870 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 RPL13P26373 211 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 RASSF7Q02833 373 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 RAPGEF1Q13905 1077 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 OTOP1Q7RTM1 612 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 RNF10Q8N5U6 811 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 SLC5A5Q92911 643 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 DRC1Q96MC2 740 aa18.23■□□□□ 0.51
PRKCSH-217ENST00000592741 SLC16A3O15427 465 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 GCNT3O95395 438 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 HOXD13P35453 343 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 PPP2R5CQ13362 524 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 ASIC2Q16515 512 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 RINT1Q6NUQ1 792 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 TBC1D5Q92609 795 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 NOX5Q96PH1 765 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 HYOU1Q9Y4L1 999 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 KIF13BQ9NQT8 1826 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 TBC1D12O60347 775 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 PSMD10O75832 226 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 FAM13AO94988 1023 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 EPB41P11171 864 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 TCP1P17987 556 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 PRELPP51888 382 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 CTTNQ14247 550 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 MAP9Q49MG5 647 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 FKBP1CQ5VVH2 108 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 CCDC70Q6NSX1 233 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 HSD17B14Q9BPX1 270 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 METTL14Q9HCE5 456 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 OLFML3Q9NRN5 406 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 AIPL1Q9NZN9 384 aa18.22■□□□□ 0.51
PRKCSH-217ENST00000592741 PDE2AO00408 941 aaPredicted RBP18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 CHMP2AO43633 222 aa18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 GAS7O60861 476 aa18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 NR3C1P04150 777 aa18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 KLHL30Q0D2K2 578 aa18.21■□□□□ 0.51
PRKCSH-217ENST00000592741 TPH2Q8IWU9 490 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms