RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 COBLO75128 1261 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 ITGB5P18084 799 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 CCND2P30279 289 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 HNRNPH3P31942 346 aaKnown RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 IREB2P48200 963 aaKnown RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 FXR1P51114 621 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS25-206ENST00000591584 ZNF131P52739 623 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 SNRPFP62306 86 aaKnown RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 PSMC6P62333 389 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 KRT76Q01546 638 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 MTMR1Q13613 665 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 MYBPC2Q14324 1141 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 PGM5Q15124 567 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 MEA1Q16626 185 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 ARHGEF16Q5VV41 709 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 ZNF662Q6ZS27 426 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 NSUN6Q8TEA1 469 aaKnown RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 ZKSCAN4Q969J2 545 aaPredicted RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 RMDN3Q96TC7 470 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 REEP2Q9BRK0 252 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 PDCD2LQ9BRP1 358 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 KCTD10Q9H3F6 313 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 UNC45AQ9H3U1 944 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 ZHX3Q9H4I2 956 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 L2HGDHQ9H9P8 463 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 RNF146Q9NTX7 359 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 TYW1Q9NV66 732 aaKnown RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 FBXO40Q9UH90 709 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 KCNG1Q9UIX4 513 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
VPS25-206ENST00000591584 EPN1Q9Y6I3 576 aaPredicted RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 ASTN2O75129 1339 aaPredicted RBP11.48□□□□□ -0.57
VPS25-206ENST00000591584 TTC26A0AVF1 554 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 KIF5CO60282 957 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 NF2P35240 595 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 EPS15P42566 896 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 QARSP47897 775 aaKnown RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 HMGCS2P54868 508 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 TUBB4BP68371 445 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 CTTNQ14247 550 aaKnown RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 LRRC41Q15345 812 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 MUM1L1Q5H9M0 696 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 TRIM65Q6PJ69 517 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 USP50Q70EL3 339 aaPredicted RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 VSIG10LQ86VR7 867 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 C4orf19Q8IY42 314 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 SYN2Q92777 582 aaPredicted RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 ATG4CQ96DT6 458 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 TAAR1Q96RJ0 339 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 IWS1Q96ST2 819 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 TTYH3Q9C0H2 523 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 MRPL44Q9H9J2 332 aaKnown RBP11.47□□□□□ -0.57
VPS25-206ENST00000591584 PXMP2Q9NR77 195 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 RGL1Q9NZL6 768 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 DAAM1Q9Y4D1 1078 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 CSADQ9Y600 493 aa11.47□□□□□ -0.57
VPS25-206ENST00000591584 ZC3H4Q9UPT8 1303 aaKnown RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 SOWAHDA6NJG2 315 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 UNCXA6NJT0 531 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 WDR64B1ANS9 1081 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 CXCL11O14625 94 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 DHX15O43143 795 aaKnown RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 SLU7O95391 586 aaKnown RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 TAL1P17542 331 aaPredicted RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 CASQ1P31415 396 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 ABCD1P33897 745 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 COPB2P35606 906 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 PSMC5P62195 406 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 MRPS9P82933 396 aaKnown RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 PPATQ06203 517 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 GOLGA8FQ08AF8 430 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 GOLGA8DPQ0D2H9 430 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 PTPN21Q16825 1174 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
VPS25-206ENST00000591584 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 ZNF746Q6NUN9 644 aaPredicted RBP11.46□□□□□ -0.57
VPS25-206ENST00000591584 RAD9BQ6WBX8 426 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms