RNA–Protein interactions for RNA: ENST00000591396.5

SPC24-205, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC24, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-205ENST00000591396 ATP6V0A1Q93050 837 aa16.67■□□□□ 0.26
SPC24-205ENST00000591396 TEKT3Q9BXF9 490 aa16.67■□□□□ 0.26
SPC24-205ENST00000591396 WNT8AQ9H1J5 351 aa16.67■□□□□ 0.26
SPC24-205ENST00000591396 KCNMB3Q9NPA1 279 aa16.67■□□□□ 0.26
SPC24-205ENST00000591396 IL23AQ9NPF7 189 aa16.67■□□□□ 0.26
SPC24-205ENST00000591396 MYH7BA7E2Y1 1941 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 DDX39AO00148 427 aaKnown RBP16.66■□□□□ 0.26
SPC24-205ENST00000591396 BACH1O14867 736 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 CCNT1O60563 726 aaKnown RBP16.66■□□□□ 0.26
SPC24-205ENST00000591396 IQCF3P0C7M6 154 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 SELPP16109 830 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 PPFIA1Q13136 1202 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 CUL4AQ13619 759 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 HIC1Q14526 733 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 TRIM71Q2Q1W2 868 aaKnown RBP16.66■□□□□ 0.26
SPC24-205ENST00000591396 PSRC1Q6PGN9 363 aaPredicted RBP16.66■□□□□ 0.26
SPC24-205ENST00000591396 RPAINQ86UA6 219 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 ZNF302Q9NR11 478 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 DISC1Q9NRI5 854 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 SETD4Q9NVD3 440 aa16.66■□□□□ 0.26
SPC24-205ENST00000591396 MAFBQ9Y5Q3 323 aaPredicted RBP16.66■□□□□ 0.26
SPC24-205ENST00000591396 MBLAC1A4D2B0 266 aaPredicted RBP16.65■□□□□ 0.26
SPC24-205ENST00000591396 SLC37A4O43826 429 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 HBP1O60381 514 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 EPHB4P54760 987 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 CCL23P55773 120 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 ZNF200P98182 395 aaPredicted RBP16.65■□□□□ 0.26
SPC24-205ENST00000591396 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
SPC24-205ENST00000591396 PLCB4Q15147 1175 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 SWSAP1Q6NVH7 229 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 TAF2Q6P1X5 1199 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 CCDC60Q8IWA6 550 aaPredicted RBP16.65■□□□□ 0.26
SPC24-205ENST00000591396 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 ATP8B4Q8TF62 1192 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 LMBR1Q8WVP7 490 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 DHX38Q92620 1227 aaKnown RBP16.65■□□□□ 0.26
SPC24-205ENST00000591396 LTBP2Q14767 1821 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 UMODL1Q5DID0 1318 aa16.65■□□□□ 0.26
SPC24-205ENST00000591396 POTEB3A0JP26 581 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 TREHO43280 583 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
SPC24-205ENST00000591396 CKBP12277 381 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 U2AF2P26368 475 aaKnown RBP eCLIP16.64■□□□□ 0.252e-9■□□□□ 10.7
SPC24-205ENST00000591396 MARK3P27448 753 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 TRAPPC10P48553 1259 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 GUCY1B3Q02153 619 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 PPP2R5CQ13362 524 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 SHHQ15465 462 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 GRIK4Q16099 956 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 TMEM240Q5SV17 173 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 PDXDC2PQ6P474 469 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 POTEBQ6S5H4 581 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 NOSTRINQ8IVI9 506 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 FAM167AQ96KS9 214 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 SMC3Q9UQE7 1217 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 COL1A2P08123 1366 aa16.64■□□□□ 0.25
SPC24-205ENST00000591396 FAM205CA6NFA0 338 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 INSRRP14616 1297 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 FOSBP53539 338 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 ZNF484Q5JVG2 852 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 LRRC8DQ7L1W4 858 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
SPC24-205ENST00000591396 HAS1Q92839 578 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 SNX21Q969T3 373 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
SPC24-205ENST00000591396 UNC45AQ9H3U1 944 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 TRPC6Q9Y210 931 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 SAMM50Q9Y512 469 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 TRIOBPQ9H2D6 2365 aa16.63■□□□□ 0.25
SPC24-205ENST00000591396 MARCH6O60337 910 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 FGBP02675 491 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 ATP4AP20648 1035 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 GJB2P29033 226 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 GNL2Q13823 731 aaKnown RBP16.62■□□□□ 0.25
SPC24-205ENST00000591396 C9orf50Q5SZB4 431 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 MARCH8Q5T0T0 291 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 RASIP1Q5U651 963 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 ZNF365Q70YC5 407 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 MIER3Q7Z3K6 550 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 RSPH3Q86UC2 560 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 HERVK_113Q902F9 699 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
SPC24-205ENST00000591396 SCLYQ96I15 445 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 UIMC1Q96RL1 719 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.251e-8■■■■□ 22.3
SPC24-205ENST00000591396 PCDH10Q9P2E7 1040 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 GABBR1Q9UBS5 961 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 TUBE1Q9UJT0 475 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 VAV3Q9UKW4 847 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 PCDHA2Q9Y5H9 948 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 IGSF9BQ9UPX0 1349 aa16.62■□□□□ 0.25
SPC24-205ENST00000591396 NEMFO60524 1076 aa16.61■□□□□ 0.25
SPC24-205ENST00000591396 DKC1O60832 514 aaKnown RBP eCLIP16.61■□□□□ 0.25
SPC24-205ENST00000591396 CXCL10P02778 98 aa16.61■□□□□ 0.25
SPC24-205ENST00000591396 THPOP40225 353 aa16.61■□□□□ 0.25
SPC24-205ENST00000591396 FXR1P51114 621 aaKnown RBP eCLIP16.61■□□□□ 0.25
SPC24-205ENST00000591396 FAM26DQ5JW98 314 aa16.61■□□□□ 0.25
SPC24-205ENST00000591396 ZNF618Q5T7W0 954 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms