RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TRMT1LQ7Z2T5 733 aaKnown RBP13.05□□□□□ -0.32
VMP1-211ENST00000591315 FAM184AQ8NB25 1140 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 FBXO18Q8NFZ0 1043 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 LMBR1Q8WVP7 490 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 OSBPL7Q9BZF2 842 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 SMARCAD1Q9H4L7 1026 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 C17orf102A2RUQ5 167 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 BACH1O14867 736 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
VMP1-211ENST00000591315 GAS7O60861 476 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 PSMD10O75832 226 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 GJB2P29033 226 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 STAT5BP51692 787 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 IGBP1P78318 339 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 ADAM17P78536 824 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 PPFIA1Q13136 1202 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 UGCGQ16739 394 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 MARCH8Q5T0T0 291 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 TRAF7Q6Q0C0 670 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 DEFB128Q7Z7B8 93 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 TDHQ8IZJ6 230 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 HAS1Q92839 578 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 ATP6V0A1Q93050 837 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.32
VMP1-211ENST00000591315 TBC1D22BQ9NU19 505 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 ZNF215Q9UL58 517 aaPredicted RBP13.04□□□□□ -0.32
VMP1-211ENST00000591315 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
VMP1-211ENST00000591315 EVPLQ92817 2033 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 EML1O00423 815 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 IQCF3P0C7M6 154 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 CKBP12277 381 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 INSRRP14616 1297 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
VMP1-211ENST00000591315 MBTPS1Q14703 1052 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 GRIK4Q16099 956 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 TMEM240Q5SV17 173 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 ZNF618Q5T7W0 954 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
VMP1-211ENST00000591315 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 B3GNT9Q6UX72 402 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 SERINC5Q86VE9 423 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 TMEM199Q8N511 208 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 LRCH3Q96II8 777 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 RIT2Q99578 217 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 TEKT3Q9BXF9 490 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 TMEM60Q9H2L4 133 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 AZI2Q9H6S1 392 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 ZNF302Q9NR11 478 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
VMP1-211ENST00000591315 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.32
VMP1-211ENST00000591315 ZNF862O60290 1169 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 THPOP40225 353 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 MCM2P49736 904 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 KRT76Q01546 638 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 PTK7Q13308 1070 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 PPIGQ13427 754 aaKnown RBP eCLIP13.02□□□□□ -0.33
VMP1-211ENST00000591315 NBR1Q14596 966 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 FAM109BQ6ICB4 259 aaPredicted RBP13.02□□□□□ -0.33
VMP1-211ENST00000591315 PPP4R3AQ6IN85 833 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 MIS18BP1Q6P0N0 1132 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 PLPPR4Q7Z2D5 763 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
VMP1-211ENST00000591315 VAV3Q9UKW4 847 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 PCDHA10Q9Y5I2 948 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
VMP1-211ENST00000591315 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 WDR64B1ANS9 1081 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 ZBTB42B2RXF5 422 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 NBNO60934 754 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 CTSHP09668 335 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 BFSP2Q13515 415 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 CUL4AQ13619 759 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
VMP1-211ENST00000591315 ZNF174Q15697 407 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 LRRC8DQ7L1W4 858 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 OTOP2Q7RTS6 562 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 AFAP1L1Q8TED9 768 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 MAFBQ9Y5Q3 323 aaPredicted RBP13.01□□□□□ -0.33
VMP1-211ENST00000591315 CHD9Q3L8U1 2897 aa13.01□□□□□ -0.33
VMP1-211ENST00000591315 NRCAMQ92823 1304 aa13□□□□□ -0.33
VMP1-211ENST00000591315 A0A1W2PPC1 479 aa13□□□□□ -0.33
VMP1-211ENST00000591315 MBLAC1A4D2B0 266 aaPredicted RBP13□□□□□ -0.33
VMP1-211ENST00000591315 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
VMP1-211ENST00000591315 PITPNM1O00562 1244 aa13□□□□□ -0.33
VMP1-211ENST00000591315 STBD1O95210 358 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms