RNA–Protein interactions for RNA: ENST00000590379.5

SPHK1-206, Transcript of sphingosine kinase 1, humanhuman

TSL 3

Gene SPHK1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-206ENST00000590379 PCYT2Q99447 389 aa23.75■■□□□ 1.39
SPHK1-206ENST00000590379 SETD4Q9NVD3 440 aa23.75■■□□□ 1.39
SPHK1-206ENST00000590379 PITPNM1O00562 1244 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 SLC37A4O43826 429 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 MARCH6O60337 910 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 PSAPP07602 524 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 CSF2RAP15509 400 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 ZNF302Q9NR11 478 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 SMC3Q9UQE7 1217 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 PCDHA10Q9Y5I2 948 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 NRCAMQ92823 1304 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 TANC1Q9C0D5 1861 aa23.74■■□□□ 1.39
SPHK1-206ENST00000590379 WDR64B1ANS9 1081 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 GJB2P29033 226 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 SLC26A2P50443 739 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 PPFIA1Q13136 1202 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 SHHQ15465 462 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 SWSAP1Q6NVH7 229 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 ETNPPLQ8TBG4 499 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 GJA10Q969M2 543 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 CTAGE1Q96RT6 745 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 WNT8AQ9H1J5 351 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 FOXP1Q9H334 677 aaPredicted RBP23.73■■□□□ 1.39
SPHK1-206ENST00000590379 TRPC6Q9Y210 931 aa23.73■■□□□ 1.39
SPHK1-206ENST00000590379 IGKV6D-21A0A0A0MT36 114 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 CHMP2AO43633 222 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 HOXC8P31273 242 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 JAK3P52333 1124 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 EPHB4P54760 987 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 HIC1Q14526 733 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 C9orf50Q5SZB4 431 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 PDXDC2PQ6P474 469 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 CCDC60Q8IWA6 550 aaPredicted RBP23.72■■□□□ 1.39
SPHK1-206ENST00000590379 AFAP1L1Q8TED9 768 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 LMBR1Q8WVP7 490 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 SCLYQ96I15 445 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 DISC1Q9NRI5 854 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 SCN5AQ14524 2016 aa23.72■■□□□ 1.39
SPHK1-206ENST00000590379 TREHO43280 583 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 PSMD10O75832 226 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 SFNP31947 248 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 PLCB4Q15147 1175 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 GRIK4Q16099 956 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 SERINC5Q86VE9 423 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 DHX38Q92620 1227 aaKnown RBP23.71■■□□□ 1.39
SPHK1-206ENST00000590379 FAM20AQ96MK3 541 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 UNC45AQ9H3U1 944 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 IL23AQ9NPF7 189 aa23.71■■□□□ 1.39
SPHK1-206ENST00000590379 POTEB3A0JP26 581 aa23.7■■□□□ 1.38
SPHK1-206ENST00000590379 TBX3O15119 743 aa23.7■■□□□ 1.38
SPHK1-206ENST00000590379 BAG4O95429 457 aaKnown RBP23.7■■□□□ 1.38
SPHK1-206ENST00000590379 POTEBQ6S5H4 581 aa23.7■■□□□ 1.38
SPHK1-206ENST00000590379 MIER3Q7Z3K6 550 aa23.7■■□□□ 1.38
SPHK1-206ENST00000590379 POTEDQ86YR6 584 aa23.7■■□□□ 1.38
SPHK1-206ENST00000590379 CKAP2LQ8IYA6 745 aa23.7■■□□□ 1.38
SPHK1-206ENST00000590379 RPUSD2Q8IZ73 545 aaKnown RBP23.7■■□□□ 1.38
SPHK1-206ENST00000590379 KCNMB3Q9NPA1 279 aa23.7■■□□□ 1.38
SPHK1-206ENST00000590379 RRN3P2A6NIE6 340 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 H3BQV1 296 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 IQCF3P0C7M6 154 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 ACRP10323 421 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 CKBP12277 381 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 INSRRP14616 1297 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 SELPP16109 830 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 ATP2B1P20020 1258 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 RFC2P35250 354 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 IGBP1P78318 339 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 RBL2Q08999 1139 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 PSRC1Q6PGN9 363 aaPredicted RBP23.69■■□□□ 1.38
SPHK1-206ENST00000590379 NOSTRINQ8IVI9 506 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 SLFN12Q8IYM2 578 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 RDM1Q8NG50 284 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 GABBR1Q9UBS5 961 aa23.69■■□□□ 1.38
SPHK1-206ENST00000590379 THPOP40225 353 aa23.68■■□□□ 1.38
SPHK1-206ENST00000590379 CUL4AQ13619 759 aa23.68■■□□□ 1.38
SPHK1-206ENST00000590379 LRRC8DQ7L1W4 858 aa23.68■■□□□ 1.38
SPHK1-206ENST00000590379 ATP8B4Q8TF62 1192 aa23.68■■□□□ 1.38
SPHK1-206ENST00000590379 RNPC3Q96LT9 517 aaKnown RBP23.68■■□□□ 1.38
SPHK1-206ENST00000590379 TUBE1Q9UJT0 475 aa23.68■■□□□ 1.38
SPHK1-206ENST00000590379 MAFBQ9Y5Q3 323 aaPredicted RBP23.68■■□□□ 1.38
SPHK1-206ENST00000590379 LAMA2P24043 3122 aaKnown RBP23.68■■□□□ 1.38
SPHK1-206ENST00000590379 HBP1O60381 514 aa23.67■■□□□ 1.38
SPHK1-206ENST00000590379 NEMFO60524 1076 aa23.67■■□□□ 1.38
SPHK1-206ENST00000590379 PARNO95453 639 aaKnown RBP23.67■■□□□ 1.38
SPHK1-206ENST00000590379 ADAM17P78536 824 aa23.67■■□□□ 1.38
SPHK1-206ENST00000590379 CALCRLQ16602 461 aa23.67■■□□□ 1.38
SPHK1-206ENST00000590379 MCTP1Q6DN14 999 aa23.67■■□□□ 1.38
SPHK1-206ENST00000590379 DEFB128Q7Z7B8 93 aa23.67■■□□□ 1.38
SPHK1-206ENST00000590379 WNT8BQ93098 351 aa23.67■■□□□ 1.38
SPHK1-206ENST00000590379 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.67■■□□□ 1.381e-9■■■□□ 14.6
SPHK1-206ENST00000590379 NOL7Q9UMY1 257 aaKnown RBP23.67■■□□□ 1.38
SPHK1-206ENST00000590379 IGSF9BQ9UPX0 1349 aa23.66■■□□□ 1.38
SPHK1-206ENST00000590379 K7ELQ4 463 aaPredicted RBP23.66■■□□□ 1.38
SPHK1-206ENST00000590379 FGBP02675 491 aa23.66■■□□□ 1.38
SPHK1-206ENST00000590379 PFKMP08237 780 aa23.66■■□□□ 1.38
SPHK1-206ENST00000590379 TRIM71Q2Q1W2 868 aaKnown RBP23.66■■□□□ 1.38
SPHK1-206ENST00000590379 TMEM240Q5SV17 173 aa23.66■■□□□ 1.38
SPHK1-206ENST00000590379 ZNF618Q5T7W0 954 aa23.66■■□□□ 1.38
SPHK1-206ENST00000590379 TAF2Q6P1X5 1199 aa23.66■■□□□ 1.38
SPHK1-206ENST00000590379 ZNF365Q70YC5 407 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms