RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 GTF2IRD1Q9UHL9 959 aa16.15■□□□□ 0.18
CALR-207ENST00000590325 SAMM50Q9Y512 469 aa16.15■□□□□ 0.18
CALR-207ENST00000590325 PCDHB6Q9Y5E3 794 aa16.15■□□□□ 0.18
CALR-207ENST00000590325 SCN10AQ9Y5Y9 1956 aa16.15■□□□□ 0.18
CALR-207ENST00000590325 TRIM43BA6NCK2 446 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 H0YGN5 161 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 EML1O00423 815 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 TLR3O15455 904 aaKnown RBP16.14■□□□□ 0.17
CALR-207ENST00000590325 HOXC8P31273 242 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 SLC26A2P50443 739 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 SPIRE1Q08AE8 756 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 RESTQ13127 1097 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 HIC1Q14526 733 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 FAM160B1Q5W0V3 765 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 MIER3Q7Z3K6 550 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 TRIM43Q96BQ3 446 aaPredicted RBP16.14■□□□□ 0.17
CALR-207ENST00000590325 CTAGE1Q96RT6 745 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 TMEM39AQ9NV64 488 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 TBX21Q9UL17 535 aa16.14■□□□□ 0.17
CALR-207ENST00000590325 ZMYND8Q9ULU4 1186 aaPredicted RBP16.14■□□□□ 0.17
CALR-207ENST00000590325 MAFBQ9Y5Q3 323 aaPredicted RBP16.14■□□□□ 0.17
CALR-207ENST00000590325 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 OR52Z1P0C646 297 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 SYN1P17600 705 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 ATP4AP20648 1035 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 TXKP42681 527 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 ZNF200P98182 395 aaPredicted RBP16.13■□□□□ 0.17
CALR-207ENST00000590325 PLCB4Q15147 1175 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 PTGISQ16647 500 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 PDXDC2PQ6P474 469 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 TTC12Q9H892 705 aaPredicted RBP16.13■□□□□ 0.17
CALR-207ENST00000590325 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
CALR-207ENST00000590325 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
CALR-207ENST00000590325 PCDH10Q9P2E7 1040 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 GABBR1Q9UBS5 961 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 PCDHA12Q9UN75 941 aa16.13■□□□□ 0.17
CALR-207ENST00000590325 C17orf102A2RUQ5 167 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 PDIA4P13667 645 aaKnown RBP16.12■□□□□ 0.17
CALR-207ENST00000590325 PTGDRQ13258 359 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 UGCGQ16739 394 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 PRKAG2Q9UGJ0 569 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 IGSF9BQ9UPX0 1349 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 DOCK5Q9H7D0 1870 aa16.12■□□□□ 0.17
CALR-207ENST00000590325 POTEB3A0JP26 581 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 ZNF862O60290 1169 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 GNAT1P11488 350 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 CYP2C9P11712 490 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 ITGB8P26012 769 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 NCAPH2Q6IBW4 605 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 POTEBQ6S5H4 581 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 LMBR1Q8WVP7 490 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 NOD1Q9Y239 953 aa16.11■□□□□ 0.17
CALR-207ENST00000590325 ALPK3Q96L96 1907 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 LAD1O00515 517 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 TREHO43280 583 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 INSRRP14616 1297 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 ADAM17P78536 824 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 PKP1Q13835 747 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 EPHA7Q15375 998 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 GRIK4Q16099 956 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 MARCH8Q5T0T0 291 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
CALR-207ENST00000590325 ATP6V0A1Q93050 837 aa16.1■□□□□ 0.17
CALR-207ENST00000590325 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
CALR-207ENST00000590325 HBP1O60381 514 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 TIMP1P01033 207 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 P4HBP07237 508 aaKnown RBP16.09■□□□□ 0.17
CALR-207ENST00000590325 TECP42680 631 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
CALR-207ENST00000590325 PSMC5P62195 406 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 ATP2C1P98194 919 aaPredicted RBP16.09■□□□□ 0.17
CALR-207ENST00000590325 PRKCEQ02156 737 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 PTK7Q13308 1070 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 FAM173BQ6P4H8 233 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 SERINC5Q86VE9 423 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 BANK1Q8NDB2 785 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
CALR-207ENST00000590325 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
CALR-207ENST00000590325 NOC4LQ9BVI4 516 aaKnown RBP16.09■□□□□ 0.17
CALR-207ENST00000590325 HIPK3Q9H422 1215 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
CALR-207ENST00000590325 MBLAC1A4D2B0 266 aaPredicted RBP16.08■□□□□ 0.16
CALR-207ENST00000590325 POTEMA6NI47 508 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 RRN3P2A6NIE6 340 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 ZBTB42B2RXF5 422 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 STBD1O95210 358 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 OATP04181 439 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 ZSCAN22P10073 491 aaPredicted RBP16.08■□□□□ 0.16
CALR-207ENST00000590325 RAG1P15918 1043 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 PRPHP41219 470 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.16
CALR-207ENST00000590325 IGBP1P78318 339 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 IL17AQ16552 155 aa16.08■□□□□ 0.16
CALR-207ENST00000590325 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms