RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
TPM4-212ENST00000590180 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 EMSYQ7Z589 1322 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 STK36Q9NRP7 1315 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 SZT2Q5T011 3432 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 CCDC194A0A1B0GVG4 234 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 RRN3P2A6NIE6 340 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 EDIL3O43854 480 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 KCNJ6P48051 423 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 ADAM17P78536 824 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 PLCB4Q15147 1175 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 NONOQ15233 471 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPM4-212ENST00000590180 PDXDC2PQ6P474 469 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 CNKSR3Q6P9H4 555 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 ABHD15Q6UXT9 468 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 TRMT1LQ7Z2T5 733 aaKnown RBP13.69□□□□□ -0.22
TPM4-212ENST00000590180 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 RSPH3Q86UC2 560 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 DAGLBQ8NCG7 672 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 TTYH1Q9H313 450 aaPredicted RBP13.69□□□□□ -0.22
TPM4-212ENST00000590180 ZNF302Q9NR11 478 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 SAMM50Q9Y512 469 aa13.69□□□□□ -0.22
TPM4-212ENST00000590180 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 M0R2N6 131 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 MSH4O15457 936 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 CXCL10P02778 98 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 PSAPP07602 524 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 FDPSP14324 419 aaKnown RBP13.68□□□□□ -0.22
TPM4-212ENST00000590180 FOSBP53539 338 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 KRT76Q01546 638 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 IKBKEQ14164 716 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 MBTPS1Q14703 1052 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 NPY5RQ15761 445 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 INF2Q27J81 1249 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 ZNF746Q6NUN9 644 aaPredicted RBP13.68□□□□□ -0.22
TPM4-212ENST00000590180 TAF2Q6P1X5 1199 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 TRAF7Q6Q0C0 670 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 NSUN7Q8NE18 718 aaKnown RBP13.68□□□□□ -0.22
TPM4-212ENST00000590180 TET1Q8NFU7 2136 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 DNAJB3Q8WWF6 145 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
TPM4-212ENST00000590180 NKX2-4Q9H2Z4 354 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 SLC28A3Q9HAS3 691 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 PCDHA10Q9Y5I2 948 aa13.68□□□□□ -0.22
TPM4-212ENST00000590180 IGKV6D-21A0A0A0MT36 114 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 HBP1O60381 514 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 JAK2O60674 1132 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 GAS7O60861 476 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 CAND2O75155 1236 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 TDP2O95551 362 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 MYOGP15173 224 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 SLC26A2P50443 739 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 TRIM29Q14134 588 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 LETM2Q2VYF4 491 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 Q4G0T1 1027 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 MARCH8Q5T0T0 291 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 PIK3AP1Q6ZUJ8 805 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 CCDC60Q8IWA6 550 aaPredicted RBP13.67□□□□□ -0.22
TPM4-212ENST00000590180 DBF4BQ8NFT6 615 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 PHOSPHO2Q8TCD6 241 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 TRAPPC12Q8WVT3 735 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 GJA10Q969M2 543 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 LENG9Q96B70 501 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 ZBTB10Q96DT7 871 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
TPM4-212ENST00000590180 SLC9A7Q96T83 725 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 ZBED2Q9BTP6 218 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 FAM49AQ9H0Q0 323 aaPredicted RBP13.67□□□□□ -0.22
TPM4-212ENST00000590180 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
TPM4-212ENST00000590180 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 STXBP5LQ9Y2K9 1186 aa13.67□□□□□ -0.22
TPM4-212ENST00000590180 TMEM265A0A087WTH1 108 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 CHMP2AO43633 222 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 MARCH6O60337 910 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 CYP3A7P24462 503 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 KRT2P35908 639 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 GRIN2CQ14957 1233 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 TCTN1Q2MV58 587 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
TPM4-212ENST00000590180 ATP8B4Q8TF62 1192 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 SEPT8Q92599 483 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 SLC5A5Q92911 643 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 RIT2Q99578 217 aa13.66□□□□□ -0.22
TPM4-212ENST00000590180 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms