RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ADCK5Q3MIX3 580 aa20.5■□□□□ 0.87
PRKCSH-211ENST00000590098 RASEFQ8IZ41 740 aa20.5■□□□□ 0.87
PRKCSH-211ENST00000590098 ZNF713Q8N859 430 aaPredicted RBP20.5■□□□□ 0.87
PRKCSH-211ENST00000590098 SMCO2A6NFE2 343 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 RRN3P2A6NIE6 340 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 RPLP2P05387 115 aaKnown RBP20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 FUT2Q10981 343 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 EPC2Q52LR7 807 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 TYW1BQ6NUM6 668 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 DNAJB3Q8WWF6 145 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 ANO3Q9BYT9 981 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 RAPGEFL1Q9UHV5 662 aa20.49■□□□□ 0.87
PRKCSH-211ENST00000590098 NLRC5Q86WI3 1866 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 MBLAC1A4D2B0 266 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 STXBP3O00186 592 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 ZNF76P36508 570 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 MGAT3Q09327 533 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 PTPROQ16827 1216 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 CEP55Q53EZ4 464 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 MARCH8Q5T0T0 291 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 CYP2W1Q8TAV3 490 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 IL17RAQ96F46 866 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 PGBD1Q96JS3 809 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 TRPC6Q9Y210 931 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 NFASCO94856 1347 aa20.48■□□□□ 0.87
PRKCSH-211ENST00000590098 INSRRP14616 1297 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 COL9A1P20849 921 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 RCAN1P53805 252 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 ACTR2P61160 394 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 AP3B2Q13367 1082 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 LPIN1Q14693 890 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 IER5Q5VY09 327 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 MRPL38Q96DV4 380 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 CDY2AQ9Y6F7 541 aa20.47■□□□□ 0.87
PRKCSH-211ENST00000590098 RALGAPA2Q2PPJ7 1873 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 CCDC196A0A1B0GTZ2 297 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 ARP10275 920 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 STAT5BP51692 787 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 GPM6BQ13491 265 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 PLPPR4Q7Z2D5 763 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 TMEM192Q8IY95 271 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 PCYT2Q99447 389 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 FAM49AQ9H0Q0 323 aaPredicted RBP20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 AGO4Q9HCK5 861 aaKnown RBP20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 TMEM260Q9NX78 707 aa20.46■□□□□ 0.87
PRKCSH-211ENST00000590098 COL4A6Q14031 1691 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 H3BNC9 293 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 M0QZ92 97 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 MEIS1O00470 390 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 CDC27P30260 824 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 SREBF1P36956 1147 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 METAP2P50579 478 aaKnown RBP eCLIP20.45■□□□□ 0.862e-6■■□□□ 12.9
PRKCSH-211ENST00000590098 MRPS6P82932 125 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 FBXO47Q5MNV8 452 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 TSHZ1Q6ZSZ6 1077 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 FIBCD1Q8N539 461 aa20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 UBE2ZQ9H832 354 aaPredicted RBP20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
PRKCSH-211ENST00000590098 ENPP3O14638 875 aa20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 ADD1P35611 737 aaKnown RBP20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 CLK2P49760 499 aaKnown RBP20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 ITGB3BPQ13352 177 aaPredicted RBP20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 PLCB4Q15147 1175 aa20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 PFKFB3Q16875 520 aaPredicted RBP20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 NIPA1Q7RTP0 329 aa20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 ZBTB10Q96DT7 871 aa20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 PCDHA2Q9Y5H9 948 aa20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 LOXHD1Q8IVV2 1947 aa20.44■□□□□ 0.86
PRKCSH-211ENST00000590098 TTC3P53804 2025 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 POTEB3A0JP26 581 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 SCG2P13521 617 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 CPA1P15085 419 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 CTNNB1P35222 781 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 SLC26A2P50443 739 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 APOBRQ0VD83 1088 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 TIGD5Q53EQ6 642 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 JAKMIP3Q5VZ66 844 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 POTEBQ6S5H4 581 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 Q6ZUG5 572 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 JAKMIP1Q96N16 626 aaKnown RBP20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 TRPV2Q9Y5S1 764 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 SQORQ9Y6N5 450 aa20.43■□□□□ 0.86
PRKCSH-211ENST00000590098 DDX39AO00148 427 aaKnown RBP20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 BACH1O14867 736 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 ATG7O95352 703 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 KCNA5P22460 613 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 CD52P31358 61 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 TMEM62Q0P6H9 643 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 FAM160B1Q5W0V3 765 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 MCTP2Q6DN12 878 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 BLOC1S2Q6QNY1 142 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 PLA2G4DQ86XP0 818 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 BANK1Q8NDB2 785 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 CCDC12Q8WUD4 166 aaPredicted RBP20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 TRAPPC12Q8WVT3 735 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 BRF1Q92994 677 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 C1QTNF1Q9BXJ1 281 aa20.42■□□□□ 0.86
PRKCSH-211ENST00000590098 FTHL17Q9BXU8 183 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms