RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 HERVK_113Q902F9 699 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 GLG1Q92896 1179 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 TNFRSF25Q93038 417 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 ATP6V0A1Q93050 837 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 ZNF577Q9BSK1 485 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 LIMCH1Q9UPQ0 1083 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 EVPLQ92817 2033 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 IGKV6D-21A0A0A0MT36 114 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 WNT7AO00755 349 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 ATG7O95352 703 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 PBX2P40425 430 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 PPFIA1Q13136 1202 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 BFSP2Q13515 415 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 PLCB4Q15147 1175 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 NONOQ15233 471 aaKnown RBP eCLIP11.2□□□□□ -0.629e-6■■■□□ 19
PTPN2-208ENST00000589216 GRIK4Q16099 956 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 UGCGQ16739 394 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 MARCH8Q5T0T0 291 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 ABHD15Q6UXT9 468 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 AFAP1L1Q8TED9 768 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 MBOAT7Q96N66 472 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 TTYH1Q9H313 450 aaPredicted RBP11.2□□□□□ -0.62
PTPN2-208ENST00000589216 ERAP1Q9NZ08 941 aa11.2□□□□□ -0.62
PTPN2-208ENST00000589216 COL6A3P12111 3177 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 IGSF9BQ9UPX0 1349 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 CHMP2AO43633 222 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 FGBP02675 491 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 INSRRP14616 1297 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 ATP4AP20648 1035 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 DNAJB2P25686 324 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 RFC2P35250 354 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 THPOP40225 353 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 IGBP1P78318 339 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 SMAD3P84022 425 aaKnown RBP11.19□□□□□ -0.62
PTPN2-208ENST00000589216 GUCY1B3Q02153 619 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 PIK3AP1Q6ZUJ8 805 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 FAM177A1Q8N128 213 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-208ENST00000589216 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 RETREG2Q8NC44 543 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 ETNPPLQ8TBG4 499 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 SLC5A5Q92911 643 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 TBC1D32Q96NH3 1257 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 SMARCAD1Q9H4L7 1026 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 TUBE1Q9UJT0 475 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 TRANK1O15050 2925 aa11.19□□□□□ -0.62
PTPN2-208ENST00000589216 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 CYP3A7-CYP3A51PA0A087WV96 503 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 CCDC194A0A1B0GVG4 234 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 MBLAC1A4D2B0 266 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-208ENST00000589216 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 ZBTB42B2RXF5 422 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 BACH1O14867 736 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 PSMD10O75832 226 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 CXCL10P02778 98 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 MMP1P03956 469 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 CYP3A7P24462 503 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 STAT5BP51692 787 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 USP11P51784 963 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 RABGGTBP53611 331 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 RABEP1Q15276 862 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 LETM2Q2VYF4 491 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 KRT40Q6A162 431 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 ZNF746Q6NUN9 644 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-208ENST00000589216 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 TMCO2Q7Z6W1 182 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-208ENST00000589216 GUCD1Q96NT3 240 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 PBX4Q9BYU1 374 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 UNC45AQ9H3U1 944 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 AZI2Q9H6S1 392 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 TRPC6Q9Y210 931 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 YBX2Q9Y2T7 364 aaKnown RBP11.18□□□□□ -0.62
PTPN2-208ENST00000589216 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
PTPN2-208ENST00000589216 COL4A6Q14031 1691 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 BTBD18B2RXH4 712 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 ZNF862O60290 1169 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 GAS7O60861 476 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 ARHGEF15O94989 841 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 PFKMP08237 780 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 MYOGP15173 224 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 KRT2P35908 639 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 DEFB103AP81534 67 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 KRT76Q01546 638 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-208ENST00000589216 Q4G0T1 1027 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 LRCH2Q5VUJ6 765 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 SWSAP1Q6NVH7 229 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 MOXD1Q6UVY6 613 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 B3GNT9Q6UX72 402 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 PLPPR4Q7Z2D5 763 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 NEK8Q86SG6 692 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 DIS3L2Q8IYB7 885 aaKnown RBP11.17□□□□□ -0.62
PTPN2-208ENST00000589216 WASF1Q92558 559 aa11.17□□□□□ -0.62
PTPN2-208ENST00000589216 FTOQ9C0B1 505 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTPN2-208ENST00000589216 FAM49AQ9H0Q0 323 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms