RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ZNF853P0CG23 659 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 MAP2K2P36507 400 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 GUCY2FP51841 1108 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 GFRA1P56159 465 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 NTRK3Q16288 839 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 NBPF9Q3BBW0 867 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 AHI1Q8N157 1196 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 SYTL5Q8TDW5 730 aaPredicted RBP9.58□□□□□ -0.88
ATG4D-210ENST00000588972 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
ATG4D-210ENST00000588972 SCLYQ96I15 445 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 PLVAPQ9BX97 442 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 BABAM1Q9NWV8 329 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 FHOD1Q9Y613 1164 aa9.58□□□□□ -0.88
ATG4D-210ENST00000588972 F8W735 103 aaPredicted RBP9.57□□□□□ -0.88
ATG4D-210ENST00000588972 FAM229AH3BQW9 127 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 TRAF5O00463 557 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 ASLP04424 464 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 ETV3P41162 512 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 EPS15P42566 896 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 PREPP48147 710 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 GNAI1P63096 354 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 MAP4K2Q12851 820 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 ZNF460Q14592 562 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 PCBP1Q15365 356 aaKnown RBP eCLIP9.57□□□□□ -0.88
ATG4D-210ENST00000588972 NOL9Q5SY16 702 aaKnown RBP9.57□□□□□ -0.88
ATG4D-210ENST00000588972 CST9Q5W186 159 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 PKN3Q6P5Z2 889 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 LINC00114Q6XXX2 140 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 KCTD13Q8WZ19 329 aa9.57□□□□□ -0.88
ATG4D-210ENST00000588972 RPGRQ92834 1020 aaKnown RBP9.57□□□□□ -0.88
ATG4D-210ENST00000588972 NOL6Q9H6R4 1146 aaKnown RBP9.57□□□□□ -0.88
ATG4D-210ENST00000588972 DIS3Q9Y2L1 958 aaKnown RBP9.57□□□□□ -0.88
ATG4D-210ENST00000588972 NUP98P52948 1817 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 ALDH1L1O75891 902 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 NPTXRO95502 500 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 ELNP15502 786 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 CPEP16870 476 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
ATG4D-210ENST00000588972 RAB6AP20340 208 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 HOXA10P31260 410 aaPredicted RBP9.56□□□□□ -0.88
ATG4D-210ENST00000588972 CALD1Q05682 793 aaKnown RBP9.56□□□□□ -0.88
ATG4D-210ENST00000588972 GRB10Q13322 594 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 SNW1Q13573 536 aaKnown RBP9.56□□□□□ -0.88
ATG4D-210ENST00000588972 PPP2R5DQ14738 602 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 HLFQ16534 295 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 SAPCD2Q86UD0 394 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 TMEM130Q8N3G9 435 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 FIBCD1Q8N539 461 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 PTPRN2Q92932 1015 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 PSMG3-AS1Q96PY0 264 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 MCOLN1Q9GZU1 580 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 PRDM14Q9GZV8 571 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 NKX2-4Q9H2Z4 354 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 ADARB2Q9NS39 739 aaKnown RBP9.56□□□□□ -0.88
ATG4D-210ENST00000588972 DAGLAQ9Y4D2 1042 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
ATG4D-210ENST00000588972 ERVV-1B6SEH8 477 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 ELL2O00472 640 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-210ENST00000588972 PPIP5K2O43314 1243 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 OPA1O60313 960 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 CELF2O95319 508 aaKnown RBP9.55□□□□□ -0.88
ATG4D-210ENST00000588972 ANXA1P04083 346 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 MYL6BP14649 208 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 HOXC12P31275 282 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 NEK4P51957 841 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 STRN3Q13033 797 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 TRIM28Q13263 835 aaKnown RBP9.55□□□□□ -0.88
ATG4D-210ENST00000588972 TTF1Q15361 905 aaPredicted RBP9.55□□□□□ -0.88
ATG4D-210ENST00000588972 PROSER3Q2NL68 480 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 NGEFQ8N5V2 710 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 TMEM145Q8NBT3 493 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 C1orf159Q96HA4 380 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 HHIPL1Q96JK4 782 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 CCDC140Q96MF4 163 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 PRR13Q9NZ81 148 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 TCEAL9Q9UHQ7 104 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 CASP8AP2Q9UKL3 1982 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 FANCIQ9NVI1 1328 aa9.55□□□□□ -0.88
ATG4D-210ENST00000588972 RBAK-RBAKDNI3L0D1 243 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 KATNA1O75449 491 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 SCG5P05408 212 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 SNRPB2P08579 225 aaKnown RBP9.54□□□□□ -0.88
ATG4D-210ENST00000588972 IGFALSP35858 605 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 KCNJ6P48051 423 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 DHCR24Q15392 516 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 SEPT7Q16181 437 aaKnown RBP9.54□□□□□ -0.88
ATG4D-210ENST00000588972 SLC35F1Q5T1Q4 408 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 DUSP27Q5VZP5 1158 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 CDPF1Q6NVV7 123 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 KIF6Q6ZMV9 814 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 LHFPL2Q6ZUX7 228 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 TSPYL6Q8N831 410 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 C8orf58Q8NAV2 365 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 NEDD1Q8NHV4 660 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 RBM17Q96I25 401 aaKnown RBP9.54□□□□□ -0.88
ATG4D-210ENST00000588972 CRAMP1Q96RY5 1269 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 SEMA6CQ9H3T2 930 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 IL16Q14005 1332 aa9.54□□□□□ -0.88
ATG4D-210ENST00000588972 MAP3K15Q6ZN16 1313 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms