RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 AIPL1Q9NZN9 384 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.88□□□□□ -1.15
SPIDR-228ENST00000588781 ARHGAP20Q9P2F6 1191 aa7.88□□□□□ -1.15
SPIDR-228ENST00000588781 POTEB3A0JP26 581 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 POTECB2RU33 542 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L15C9J2P7 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L13C9JLJ4 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L11C9JVI0 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L18D6R9N7 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L22D6RA61 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L17D6RBQ6 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L19D6RCP7 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L20D6RJB6 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 E9PMD0 336 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 GCOM1H8Y6P7 765 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-228ENST00000588781 MEIS2O14770 477 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 FLOT1O75955 427 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 SASH3O75995 380 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 FAM13AO94988 1023 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 NDUFB10O96000 172 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 MMP10P09238 476 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 POLR2MP0CAP2 368 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 XRCC5P13010 732 aaKnown RBP7.87□□□□□ -1.15
SPIDR-228ENST00000588781 RFX1P22670 979 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 NR2F2P24468 414 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 KLK7P49862 253 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 STAT2P52630 851 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 EPHB4P54760 987 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 TNNC1P63316 161 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L24Q0WX57 530 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 RAPGEF1Q13905 1077 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 MYBPC2Q14324 1141 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 LRRC41Q15345 812 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 SLC18A3Q16572 532 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 PRR16Q569H4 304 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 EMBQ6PCB8 327 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 USP17L6PQ6QN14 398 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 POTEBQ6S5H4 581 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 HS2ST1Q7LGA3 356 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 KCNK18Q7Z418 384 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 KIAA0825Q8IV33 1275 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 IFT20Q8IY31 132 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 SYCE1Q8N0S2 351 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 ETNPPLQ8TBG4 499 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 PBKQ96KB5 322 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 CAPZA3Q96KX2 299 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 OSBPL9Q96SU4 736 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 RUFY1Q96T51 708 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 MMS19Q96T76 1030 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 LACRTQ9GZZ8 138 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 VPS33BQ9H267 617 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 KCTD10Q9H3F6 313 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 ZHX3Q9H4I2 956 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 KCNQ5Q9NR82 932 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 OLFML3Q9NRN5 406 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 PCDH10Q9P2E7 1040 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 INTUQ9ULD6 942 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
SPIDR-228ENST00000588781 A0A0U1RQJ8 604 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 GOLGA8KD6RF30 607 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 TULP1O00294 542 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 ENC1O14682 589 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 EDIL3O43854 480 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 N4BP1O75113 896 aaKnown RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 MED24O75448 989 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 TOMM70O94826 608 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 MOCS3O95396 460 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 FERP16591 822 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 POLR2FP61218 127 aaKnown RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 CYP27A1Q02318 531 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 CETN1Q12798 172 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 TCP10Q12799 353 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 KCNH2Q12809 1159 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 NFIAQ12857 509 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 GIT2Q14161 759 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 NAB2Q15742 525 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 EXOC3L4Q17RC7 722 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 ASTE1Q2TB18 679 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 MUM1L1Q5H9M0 696 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 FKBP1CQ5VVH2 108 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 ALS2CLQ60I27 953 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 C8orf74Q6P047 294 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 CCNI2Q6ZMN8 369 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 COL23A1Q86Y22 540 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 NELFCDQ8IXH7 590 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 EIF1ADQ8N9N8 165 aaKnown RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 NOA1Q8NC60 698 aaKnown RBP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 SLC17A8Q8NDX2 589 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 COG1Q8WTW3 980 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 SCFD1Q8WVM8 642 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 ATRIPQ8WXE1 791 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 CRYGNQ8WXF5 182 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 HPS3Q969F9 1004 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 KLRG1Q96E93 195 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 NUDT12Q9BQG2 462 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.86□□□□□ -1.15
SPIDR-228ENST00000588781 EPC1Q9H2F5 836 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 DBNDD1Q9H9R9 158 aa7.86□□□□□ -1.15
SPIDR-228ENST00000588781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms