RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 UIMC1Q96RL1 719 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 UHRF1Q96T88 793 aaPredicted RBP16.38■□□□□ 0.21
VMP1-206ENST00000587945 SDF4Q9BRK5 362 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 IFIH1Q9BYX4 1025 aaKnown RBP16.38■□□□□ 0.21
VMP1-206ENST00000587945 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
VMP1-206ENST00000587945 TUBE1Q9UJT0 475 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 XIRP2A4UGR9 3374 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 MBLAC1A4D2B0 266 aaPredicted RBP16.37■□□□□ 0.21
VMP1-206ENST00000587945 hCG_1984214I3L0E3 225 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 MEIS1O00470 390 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 BMP1P13497 986 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 ZNF76P36508 570 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 SREBF1P36956 1147 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 CLK2P49760 499 aaKnown RBP16.37■□□□□ 0.21
VMP1-206ENST00000587945 RCAN1P53805 252 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 ACTR2P61160 394 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 MGAT3Q09327 533 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 LPIN1Q14693 890 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 PFKFB3Q16875 520 aaPredicted RBP16.37■□□□□ 0.21
VMP1-206ENST00000587945 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 ZNF713Q8N859 430 aaPredicted RBP16.37■□□□□ 0.21
VMP1-206ENST00000587945 TRAPPC12Q8WVT3 735 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 TRPC6Q9Y210 931 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 MUC3AQ02505 3323 aa16.37■□□□□ 0.21
VMP1-206ENST00000587945 DDX39AO00148 427 aaKnown RBP16.36■□□□□ 0.21
VMP1-206ENST00000587945 SCG2P13521 617 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 AP3B2Q13367 1082 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 RSPH3Q86UC2 560 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 FBXO22Q8NEZ5 403 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
VMP1-206ENST00000587945 APBB2Q92870 758 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 FAM49AQ9H0Q0 323 aaPredicted RBP16.36■□□□□ 0.21
VMP1-206ENST00000587945 AZI2Q9H6S1 392 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 CDY2AQ9Y6F7 541 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 PTPRSQ13332 1948 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 NFASCO94856 1347 aa16.36■□□□□ 0.21
VMP1-206ENST00000587945 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 RRN3P2A6NIE6 340 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 FAM86B1E9PN63 330 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 CCNE2O96020 404 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 FAM86B2P0C5J1 330 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 PKN1Q16512 942 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 TEX2Q8IWB9 1127 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 PHKBQ93100 1093 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 HLA-CQ95604 372 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 GLT8D2Q9H1C3 349 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
VMP1-206ENST00000587945 REV3LO60673 3130 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 STAT5BP51692 787 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 MRPS6P82932 125 aaKnown RBP16.34■□□□□ 0.21
VMP1-206ENST00000587945 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 AAK1Q2M2I8 961 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 FBXO47Q5MNV8 452 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 PLPPR4Q7Z2D5 763 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
VMP1-206ENST00000587945 LMCD1Q9NZU5 365 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 COG5Q9UP83 839 aa16.34■□□□□ 0.21
VMP1-206ENST00000587945 POTEB3A0JP26 581 aa16.33■□□□□ 0.2
VMP1-206ENST00000587945 ENPP3O14638 875 aa16.33■□□□□ 0.2
VMP1-206ENST00000587945 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
VMP1-206ENST00000587945 ATG7O95352 703 aa16.33■□□□□ 0.2
VMP1-206ENST00000587945 POTEBQ6S5H4 581 aa16.33■□□□□ 0.2
VMP1-206ENST00000587945 RASGRP4Q8TDF6 673 aa16.33■□□□□ 0.2
VMP1-206ENST00000587945 CRYGNQ8WXF5 182 aa16.33■□□□□ 0.2
VMP1-206ENST00000587945 ZMYND12Q9H0C1 365 aa16.33■□□□□ 0.2
VMP1-206ENST00000587945 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
VMP1-206ENST00000587945 TRANK1O15050 2925 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 BACH1O14867 736 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 DHX15O43143 795 aaKnown RBP16.32■□□□□ 0.2
VMP1-206ENST00000587945 CD52P31358 61 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
VMP1-206ENST00000587945 NTRK3Q16288 839 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 ABHD15Q6UXT9 468 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 TSHZ1Q6ZSZ6 1077 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 NIPA1Q7RTP0 329 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 TMEM192Q8IY95 271 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 IL17RAQ96F46 866 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 AGXT2Q9BYV1 514 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 PCDHA2Q9Y5H9 948 aa16.32■□□□□ 0.2
VMP1-206ENST00000587945 NID2Q14112 1375 aa16.31■□□□□ 0.2
VMP1-206ENST00000587945 IGKV6D-21A0A0A0MT36 114 aa16.31■□□□□ 0.2
VMP1-206ENST00000587945 IPO5O00410 1097 aaKnown RBP16.31■□□□□ 0.2
VMP1-206ENST00000587945 REC8O95072 547 aa16.31■□□□□ 0.2
VMP1-206ENST00000587945 CYP3A4P08684 503 aa16.31■□□□□ 0.2
VMP1-206ENST00000587945 PSMA5P28066 241 aa16.31■□□□□ 0.2
VMP1-206ENST00000587945 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
VMP1-206ENST00000587945 AKAP17AQ02040 695 aaKnown RBP16.31■□□□□ 0.2
VMP1-206ENST00000587945 GPM6BQ13491 265 aa16.31■□□□□ 0.2
VMP1-206ENST00000587945 IER5Q5VY09 327 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms