RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 AFPP02771 609 aaKnown RBP20.37■□□□□ 0.85
DDX39A-206ENST00000587730 GLI1P08151 1106 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 AKR1B1P15121 316 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 HSPA9P38646 679 aaKnown RBP20.37■□□□□ 0.85
DDX39A-206ENST00000587730 ATP2B2Q01814 1243 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 TTMPQ5BVD1 217 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 SYCE1Q8N0S2 351 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 CCDC43Q96MW1 224 aaKnown RBP20.37■□□□□ 0.85
DDX39A-206ENST00000587730 SPAG5Q96R06 1193 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 TAF1DQ9H5J8 278 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-206ENST00000587730 GGA2Q9UJY4 613 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 NFU1Q9UMS0 254 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 DAAM1Q9Y4D1 1078 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 A0A087X0T9 212 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 PDXKO00764 312 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 HLA-DOAP06340 250 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 FAM228BP0C875 321 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 KCNQ4P56696 695 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 KCNH2Q12809 1159 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 ECM1Q16610 540 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 UBE2SQ16763 222 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 ISCUQ9H1K1 167 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 HDAC9Q9UKV0 1011 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 FAM169AQ9Y6X4 670 aa20.37■□□□□ 0.85
DDX39A-206ENST00000587730 GTPBP10A4D1E9 387 aaKnown RBP20.36■□□□□ 0.85
DDX39A-206ENST00000587730 NR2F2P24468 414 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 CARSP49589 748 aaKnown RBP20.36■□□□□ 0.85
DDX39A-206ENST00000587730 NPEPPSP55786 919 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 FAM133AQ8N9E0 248 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 C3orf20Q8ND61 904 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 GLIS3Q8NEA6 775 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 MS4A14Q96JA4 679 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 KRT12Q99456 494 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 DHX36Q9H2U1 1008 aaKnown RBP20.36■□□□□ 0.85
DDX39A-206ENST00000587730 ADAMTS1Q9UHI8 967 aa20.36■□□□□ 0.85
DDX39A-206ENST00000587730 FTCDO95954 541 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 HOXA10P31260 410 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-206ENST00000587730 USP8P40818 1118 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 SLC12A3P55017 1021 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 MTMR3Q13615 1198 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 CLUL1Q15846 466 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 KNOP1Q1ED39 458 aaKnown RBP20.35■□□□□ 0.85
DDX39A-206ENST00000587730 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 IFT81Q8WYA0 676 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 ARL8AQ96BM9 186 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 ZBTB9Q96C00 473 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 ATP6V1G3Q96LB4 118 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 EHD4Q9H223 541 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 DNM3Q9UQ16 869 aa20.35■□□□□ 0.85
DDX39A-206ENST00000587730 NDUFAB1O14561 156 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 PPP1R11O60927 126 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-206ENST00000587730 KIF4AO95239 1232 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 XRCC5P13010 732 aaKnown RBP20.34■□□□□ 0.85
DDX39A-206ENST00000587730 NOP2P46087 812 aaKnown RBP20.34■□□□□ 0.85
DDX39A-206ENST00000587730 EXOC3L4Q17RC7 722 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 BMT2Q1RMZ1 405 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 PRR5LQ6MZQ0 368 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 NELFCDQ8IXH7 590 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 TBC1D16Q8TBP0 767 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 FAM20AQ96MK3 541 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 CRAMP1Q96RY5 1269 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 COA1Q9GZY4 146 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 SMARCAL1Q9NZC9 954 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 EHD2Q9NZN4 543 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 E9PMD0 336 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 PGRMC1O00264 195 aaKnown RBP20.34■□□□□ 0.85
DDX39A-206ENST00000587730 KIAA0754O94854 1291 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 ERLIN2O94905 339 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 FOSP01100 380 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-206ENST00000587730 UCHL3P15374 230 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 PPP2R5EQ16537 467 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 RUFY4Q6ZNE9 571 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 YTHDF3Q7Z739 585 aaKnown RBP20.34■□□□□ 0.85
DDX39A-206ENST00000587730 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 CASKIN2Q8WXE0 1202 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 ANO3Q9BYT9 981 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 EPN3Q9H201 632 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 SLITRK6Q9H5Y7 841 aa20.34■□□□□ 0.85
DDX39A-206ENST00000587730 NR1D1P20393 614 aa20.33■□□□□ 0.85
DDX39A-206ENST00000587730 RPA1P27694 616 aa20.33■□□□□ 0.85
DDX39A-206ENST00000587730 BIRC3Q13489 604 aa20.33■□□□□ 0.85
DDX39A-206ENST00000587730 Q4G0T1 1027 aa20.33■□□□□ 0.85
DDX39A-206ENST00000587730 EPM2AIP1Q7L775 607 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-206ENST00000587730 IRF2BP2Q7Z5L9 587 aa20.33■□□□□ 0.85
DDX39A-206ENST00000587730 SYT2Q8N9I0 419 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-206ENST00000587730 DIS3Q9Y2L1 958 aaKnown RBP20.33■□□□□ 0.85
DDX39A-206ENST00000587730 POTEB3A0JP26 581 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 ZNF233A6NK53 670 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 POTECB2RU33 542 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 KCNK3O14649 394 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 FERP16591 822 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 GAP43P17677 238 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 PTK2Q05397 1052 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 POTEBQ6S5H4 581 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 SMIM5Q71RC9 77 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.32■□□□□ 0.842e-9■■□□□ 12
DDX39A-206ENST00000587730 TYW1Q9NV66 732 aaKnown RBP20.32■□□□□ 0.84
DDX39A-206ENST00000587730 SUCLA2Q9P2R7 463 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-206ENST00000587730 NAGPAQ9UK23 515 aa20.32■□□□□ 0.84
DDX39A-206ENST00000587730 PPP1R12BO60237 982 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms