RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SUPT20HL2P0C7V6 817 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 KRT85P78386 507 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 MFSD10Q14728 455 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 KIAA0753Q2KHM9 967 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 EARS2Q5JPH6 523 aaKnown RBP18.18■□□□□ 0.5
ATG4D-205ENST00000586477 FOXD4L5Q5VV16 416 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-205ENST00000586477 CYFIP1Q7L576 1253 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 SLFN12Q8IYM2 578 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 GIMAP8Q8ND71 665 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-205ENST00000586477 FOXD4L4Q8WXT5 416 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-205ENST00000586477 MBOAT7Q96N66 472 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 TTYH1Q9H313 450 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-205ENST00000586477 JADE2Q9NQC1 790 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 GTF2IRD1Q9UHL9 959 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 TCEAL9Q9UHQ7 104 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 UBIAD1Q9Y5Z9 338 aa18.18■□□□□ 0.5
ATG4D-205ENST00000586477 GRXCR1A8MXD5 290 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 MEIS1O00470 390 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 ATP2B1P20020 1258 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 ZNF200P98182 395 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-205ENST00000586477 GPNMBQ14956 572 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 PTGISQ16647 500 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 CSPP1Q1MSJ5 1256 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 PRR16Q569H4 304 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 PSRC1Q6PGN9 363 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-205ENST00000586477 PLA2G4DQ86XP0 818 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 HERVK_113Q902F9 699 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 WNT8BQ93098 351 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 GPR20Q99678 358 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 MLXIPQ9HAP2 919 aa18.17■□□□□ 0.5
ATG4D-205ENST00000586477 PTPRSQ13332 1948 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 PRUNE2Q8WUY3 3088 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 FAM205CA6NFA0 338 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 LGALS2P05162 132 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 KCNA2P16389 499 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 MCM7P33993 719 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
ATG4D-205ENST00000586477 METTL7BQ6UX53 244 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 FAM20AQ96MK3 541 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 SENP7Q9BQF6 1050 aa18.16■□□□□ 0.5
ATG4D-205ENST00000586477 SCAND2PQ9GZW5 306 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-205ENST00000586477 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.16■□□□□ 0.5
ATG4D-205ENST00000586477 MORC2Q9Y6X9 1032 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-205ENST00000586477 IGLV3-22A0A075B6J6 115 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 FAM86B1E9PN63 330 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 DLL1O00548 723 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 PITPNM1O00562 1244 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 TDP2O95551 362 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 YEATS4O95619 227 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 FAM86B2P0C5J1 330 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 IQCF3P0C7M6 154 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 HOXC8P31273 242 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 TOB1P50616 345 aaPredicted RBP18.15■□□□□ 0.5
ATG4D-205ENST00000586477 NEDD9Q14511 834 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 CALCRLQ16602 461 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 TRAF7Q6Q0C0 670 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 CYP2W1Q8TAV3 490 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 RAB34Q9BZG1 259 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 SEMA6BQ9H3T3 888 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 TBC1D22BQ9NU19 505 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 UNC80Q8N2C7 3258 aa18.15■□□□□ 0.5
ATG4D-205ENST00000586477 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-205ENST00000586477 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-205ENST00000586477 FGBP02675 491 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 NCLP19338 710 aaKnown RBP18.14■□□□□ 0.49
ATG4D-205ENST00000586477 PBX2P40425 430 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 PRPHP41219 470 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 RBL2Q08999 1139 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 ZNF174Q15697 407 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 TMEM266Q2M3C6 531 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 ARL6IP4Q66PJ3 421 aaKnown RBP18.14■□□□□ 0.49
ATG4D-205ENST00000586477 OTOP2Q7RTS6 562 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 TRIM50Q86XT4 487 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 KCNG4Q8TDN1 519 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 RIT2Q99578 217 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 SDF4Q9BRK5 362 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 ZNF577Q9BSK1 485 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 KATNAL1Q9BW62 490 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 KCNH7Q9NS40 1196 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 PCDHB6Q9Y5E3 794 aa18.14■□□□□ 0.49
ATG4D-205ENST00000586477 H3BRB1 525 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 IPO5O00410 1097 aaKnown RBP18.13■□□□□ 0.49
ATG4D-205ENST00000586477 OR52Z1P0C646 297 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 NASPP49321 788 aaPredicted RBP18.13■□□□□ 0.49
ATG4D-205ENST00000586477 STK38Q15208 465 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 SF3A1Q15459 793 aaKnown RBP18.13■□□□□ 0.49
ATG4D-205ENST00000586477 TCTN1Q2MV58 587 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 DEFB128Q7Z7B8 93 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 C7orf31Q8N865 590 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 GBP4Q96PP9 640 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 CDX2Q99626 313 aaPredicted RBP18.13■□□□□ 0.49
ATG4D-205ENST00000586477 TUT1Q9H6E5 874 aaKnown RBP18.13■□□□□ 0.49
ATG4D-205ENST00000586477 MYO9BQ13459 2157 aa18.13■□□□□ 0.49
ATG4D-205ENST00000586477 GSTTP1A0A1W2PQM5 241 aa18.12■□□□□ 0.49
ATG4D-205ENST00000586477 DNAJB2P25686 324 aa18.12■□□□□ 0.49
ATG4D-205ENST00000586477 ATP2C1P98194 919 aaPredicted RBP18.12■□□□□ 0.49
ATG4D-205ENST00000586477 DNM1Q05193 864 aaKnown RBP18.12■□□□□ 0.49
ATG4D-205ENST00000586477 PTGDRQ13258 359 aa18.12■□□□□ 0.49
ATG4D-205ENST00000586477 FAM173BQ6P4H8 233 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms