RNA–Protein interactions for RNA: ENST00000586315.1

ATP6V0A1-210, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-210	ENST00000586315	ST13P5	Q8NFI4	369 aa	Predicted RBP	3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PCDH19	Q8TAB3	1148 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SORCS2	Q96PQ0	1159 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	WRNIP1	Q96S55	665 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ZFYVE21	Q9BQ24	234 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SPATA9	Q9BWV2	254 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	IGSF5	Q9NSI5	407 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PFDN2	Q9UHV9	154 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	CBLC	Q9ULV8	474 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	HS3ST3A1	Q9Y663	406 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SLC4A7	Q9Y6M7	1214 aa		3.39	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	IQCA1L	A6NCM1	817 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315		H0Y858	1186 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SRGAP2C	P0DJJ0	459 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PTPN1	P18031	435 aa	Known RBP	3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	JAM2	P57087	298 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SEC23A	Q15436	765 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	TBR1	Q16650	682 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	RNF151	Q2KHN1	245 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	FSTL4	Q6MZW2	842 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315		Q6ZSN1	163 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PTRH1	Q86Y79	214 aa	Known RBP	3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	EXOC2	Q96KP1	924 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	LMF1	Q96S06	567 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	VPS11	Q9H270	941 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	RIC8B	Q9NVN3	520 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ING1	Q9UK53	422 aa	Predicted RBP	3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SRPK3	Q9UPE1	567 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ZFR2	Q9UPR6	939 aa	Known RBP	3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	MSRB2	Q9Y3D2	182 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PCDHA9	Q9Y5H5	950 aa		3.38	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	CCDC85C	A6NKD9	419 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	MATN2	O00339	956 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	MUSK	O15146	869 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	CHGB	P05060	677 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	FAM153B	P0C7A2	387 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PDE6A	P16499	860 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	KRT15	P19012	456 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	MC4R	P32245	332 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	RBM25	P49756	843 aa	Known RBP	3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	RRAD	P55042	308 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	KLF10	Q13118	480 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	TOP3A	Q13472	1001 aa	Predicted RBP	3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	TM4SF20	Q53R12	229 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	AGBL4	Q5VU57	503 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	LARP4	Q71RC2	724 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	FUK	Q8N0W3	1084 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	GIMAP8	Q8ND71	665 aa	Predicted RBP	3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	NEIL1	Q96FI4	390 aa	Predicted RBP	3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	MRI	Q9BWK5	157 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	KRTAP9-8	Q9BYQ0	159 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SEC61A2	Q9H9S3	476 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SRRD	Q9UH36	339 aa		3.37	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	TRBV23-1	A0A0A0MS06	115 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PDPK1	O15530	556 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	C4BPA	P04003	597 aa	Known RBP	3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	POLD1	P28340	1107 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ADCY8	P40145	1251 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SELENOP	P49908	381 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	HMGA2	P52926	109 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	IL13RA1	P78552	427 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	DGCR2	P98153	550 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PAK1	Q13153	545 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	USP10	Q14694	798 aa	Known RBP	3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	GPR19	Q15760	415 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	LRSAM1	Q6UWE0	723 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SCUBE1	Q8IWY4	988 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	LRRC47	Q8N1G4	583 aa	Known RBP	3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	EXTL1	Q92935	676 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ADO	Q96SZ5	270 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	CDK5RAP1	Q96SZ6	601 aa	Known RBP	3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	DPYSL5	Q9BPU6	564 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ALG1	Q9BT22	464 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	AMN	Q9BXJ7	453 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	CARD11	Q9BXL7	1154 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	TRIM55	Q9BYV6	548 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SMURF1	Q9HCE7	757 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	CATSPERZ	Q9NTU4	200 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	BTBD7	Q9P203	1132 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	CDC42EP3	Q9UKI2	254 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	TCAF1	Q9Y4C2	921 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	TESMIN	Q9Y4I5	508 aa		3.36	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	FAM221B	A6H8Z2	402 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	NPIPB8	E9PQR5	432 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ZNF561-AS1	K7EIQ3	104 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	ARVCF	O00192	962 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	WNT9A	O14904	365 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SUV39H1	O43463	412 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	MPIG6B	O95866	241 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	GDF5	P43026	501 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	DNM2	P50570	870 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	GUCY1A3	Q02108	690 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	SSRP1	Q08945	709 aa	Known RBP	3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	DUSP8	Q13202	625 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	C16orf59	Q7L2K0	433 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	MTDH	Q86UE4	582 aa	Known RBP	3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	PTPRN2	Q92932	1015 aa		3.35	□□□□□ -1.87
ATP6V0A1-210	ENST00000586315	FBXW5	Q969U6	566 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms