RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 CHMP4BP1P59074 171 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 MBTPS1Q14703 1052 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 NFKBIBQ15653 356 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 UTP14CQ5TAP6 766 aaKnown RBP9.8□□□□□ -0.84
ATG4D-202ENST00000585437 ABHD15Q6UXT9 468 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 LRRC8DQ7L1W4 858 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 PLPPR4Q7Z2D5 763 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 KRT25Q7Z3Z0 450 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 RPAINQ86UA6 219 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 RPUSD2Q8IZ73 545 aaKnown RBP9.8□□□□□ -0.84
ATG4D-202ENST00000585437 TBCKQ8TEA7 893 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 TNFRSF25Q93038 417 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 SMARCAD1Q9H4L7 1026 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 GJB4Q9NTQ9 266 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 TBC1D22BQ9NU19 505 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 CXXC1Q9P0U4 656 aaPredicted RBP9.8□□□□□ -0.84
ATG4D-202ENST00000585437 ORC3Q9UBD5 711 aaPredicted RBP9.8□□□□□ -0.84
ATG4D-202ENST00000585437 KCNJ14Q9UNX9 436 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 ATG2AQ2TAZ0 1938 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 IGSF9BQ9UPX0 1349 aa9.8□□□□□ -0.84
ATG4D-202ENST00000585437 SPTBN5Q9NRC6 3674 aaKnown RBP9.79□□□□□ -0.84
ATG4D-202ENST00000585437 TMEM265A0A087WTH1 108 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 NBNO60934 754 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 DTNBO60941 627 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 FGBP02675 491 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 SLC26A2P50443 739 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 MKRN4PQ13434 485 aaPredicted RBP9.79□□□□□ -0.84
ATG4D-202ENST00000585437 NONOQ15233 471 aaKnown RBP eCLIP9.79□□□□□ -0.84
ATG4D-202ENST00000585437 Q4G0T1 1027 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 PRR16Q569H4 304 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 MARCH8Q5T0T0 291 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 ZNF618Q5T7W0 954 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 ZNF746Q6NUN9 644 aaPredicted RBP9.79□□□□□ -0.84
ATG4D-202ENST00000585437 B3GNT9Q6UX72 402 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 CCDC60Q8IWA6 550 aaPredicted RBP9.79□□□□□ -0.84
ATG4D-202ENST00000585437 SMAP1Q8IYB5 467 aaPredicted RBP9.79□□□□□ -0.84
ATG4D-202ENST00000585437 RETREG2Q8NC44 543 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 WASF1Q92558 559 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 SLC5A5Q92911 643 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 ATP6V0A1Q93050 837 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 ZNF577Q9BSK1 485 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 SETD4Q9NVD3 440 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 LIMCH1Q9UPQ0 1083 aa9.79□□□□□ -0.84
ATG4D-202ENST00000585437 REV3LO60673 3130 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 COL1A2P08123 1366 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 MYH15Q9Y2K3 1946 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-202ENST00000585437 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-202ENST00000585437 MSH4O15457 936 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 JAK2O60674 1132 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 PSMD10O75832 226 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 TDP2O95551 362 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 MMP1P03956 469 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 GNAT1P11488 350 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 XBP1P17861 261 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 KRT76Q01546 638 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 PPFIA1Q13136 1202 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 PLCB4Q15147 1175 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 GRIK4Q16099 956 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 OTOP2Q7RTS6 562 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 ETNPPLQ8TBG4 499 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 GLG1Q92896 1179 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 RIT2Q99578 217 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 LLPHQ9BRT6 129 aaKnown RBP9.78□□□□□ -0.84
ATG4D-202ENST00000585437 MTIF3Q9H2K0 278 aaKnown RBP9.78□□□□□ -0.84
ATG4D-202ENST00000585437 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-202ENST00000585437 MTMR10Q9NXD2 777 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 TUBE1Q9UJT0 475 aa9.78□□□□□ -0.84
ATG4D-202ENST00000585437 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-202ENST00000585437 DDX39AO00148 427 aaKnown RBP9.77□□□□□ -0.85
ATG4D-202ENST00000585437 INSRRP14616 1297 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 ATP4AP20648 1035 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 PTMSP20962 102 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 DNAJB2P25686 324 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 MARK3P27448 753 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 STAT5BP51692 787 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 MGAT3Q09327 533 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 INF2Q27J81 1249 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 TCTN1Q2MV58 587 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 EARS2Q5JPH6 523 aaKnown RBP9.77□□□□□ -0.85
ATG4D-202ENST00000585437 FAM26DQ5JW98 314 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 PPP4R3AQ6IN85 833 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 TAF2Q6P1X5 1199 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 CNKSR3Q6P9H4 555 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 Q7L0L9 218 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 DEFB128Q7Z7B8 93 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 NEK8Q86SG6 692 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 DEFB123Q8N688 67 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 ATP8B4Q8TF62 1192 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 ZSCAN31Q96LW9 406 aaPredicted RBP9.77□□□□□ -0.85
ATG4D-202ENST00000585437 PBX4Q9BYU1 374 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 TTYH1Q9H313 450 aaPredicted RBP9.77□□□□□ -0.85
ATG4D-202ENST00000585437 AZI2Q9H6S1 392 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 KCNMB3Q9NPA1 279 aa9.77□□□□□ -0.85
ATG4D-202ENST00000585437 PRUNE2Q8WUY3 3088 aa9.76□□□□□ -0.85
ATG4D-202ENST00000585437 UNC80Q8N2C7 3258 aa9.76□□□□□ -0.85
ATG4D-202ENST00000585437 CCDC194A0A1B0GVG4 234 aa9.76□□□□□ -0.85
ATG4D-202ENST00000585437 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms