RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 MAP3K20Q9NYL2 800 aaKnown RBP20.98■□□□□ 0.95
TOP3A-220ENST00000585031 RTEL1Q9NZ71 1219 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 MAD2L2Q9UI95 211 aa20.98■□□□□ 0.95
TOP3A-220ENST00000585031 TRIM6-TRIM34B2RNG4 842 aa20.97■□□□□ 0.95
TOP3A-220ENST00000585031 NOP56O00567 594 aaKnown RBP20.97■□□□□ 0.95
TOP3A-220ENST00000585031 ZBTB5O15062 677 aa20.97■□□□□ 0.95
TOP3A-220ENST00000585031 GATMP50440 423 aa20.97■□□□□ 0.95
TOP3A-220ENST00000585031 NAALADL2Q58DX5 795 aa20.97■□□□□ 0.95
TOP3A-220ENST00000585031 IQCA1Q86XH1 822 aa20.97■□□□□ 0.95
TOP3A-220ENST00000585031 POF1BQ8WVV4 589 aa20.97■□□□□ 0.95
TOP3A-220ENST00000585031 PPP2R3CQ969Q6 453 aa20.97■□□□□ 0.95
TOP3A-220ENST00000585031 INPP4AQ96PE3 977 aaPredicted RBP20.97■□□□□ 0.95
TOP3A-220ENST00000585031 PRR23AA6NEV1 266 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 KLRF2D3W0D1 207 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 ZNF213O14771 459 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 GALR2O43603 387 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-220ENST00000585031 ATF7P17544 494 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-220ENST00000585031 NBL1P41271 181 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 SP4Q02446 784 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 MARCH8Q5T0T0 291 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 ANKRD45Q5TZF3 282 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 SUSD6Q92537 303 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 TRPC6Q9Y210 931 aa20.96■□□□□ 0.95
TOP3A-220ENST00000585031 FNDC1Q4ZHG4 1894 aaPredicted RBP20.95■□□□□ 0.94
TOP3A-220ENST00000585031 GCOM1H8Y6P7 765 aaPredicted RBP20.95■□□□□ 0.94
TOP3A-220ENST00000585031 PER2O15055 1255 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 POLR2MP0CAP2 368 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 CD52P31358 61 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 PAN2Q504Q3 1202 aaKnown RBP20.95■□□□□ 0.94
TOP3A-220ENST00000585031 CCDC178Q5BJE1 867 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 DNAJB3Q8WWF6 145 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 RIPOR3Q96MK2 946 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 PIGSQ96S52 555 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 FRMPD4Q14CM0 1322 aa20.95■□□□□ 0.94
TOP3A-220ENST00000585031 PALM3A6NDB9 673 aaPredicted RBP20.94■□□□□ 0.94
TOP3A-220ENST00000585031 NEDD9Q14511 834 aa20.94■□□□□ 0.94
TOP3A-220ENST00000585031 PTPN21Q16825 1174 aa20.94■□□□□ 0.94
TOP3A-220ENST00000585031 HOMER1Q86YM7 354 aa20.94■□□□□ 0.94
TOP3A-220ENST00000585031 SAMD3Q8N6K7 520 aa20.94■□□□□ 0.94
TOP3A-220ENST00000585031 CDY2AQ9Y6F7 541 aa20.94■□□□□ 0.94
TOP3A-220ENST00000585031 NRCAMQ92823 1304 aa20.94■□□□□ 0.94
TOP3A-220ENST00000585031 GVINP1Q7Z2Y8 2422 aa20.94■□□□□ 0.94
TOP3A-220ENST00000585031 CYTH3O43739 400 aa20.93■□□□□ 0.94
TOP3A-220ENST00000585031 PPFIA3O75145 1194 aa20.93■□□□□ 0.94
TOP3A-220ENST00000585031 SEC23AQ15436 765 aa20.93■□□□□ 0.94
TOP3A-220ENST00000585031 CMTR2Q8IYT2 770 aaKnown RBP20.93■□□□□ 0.94
TOP3A-220ENST00000585031 ATP8B4Q8TF62 1192 aa20.93■□□□□ 0.94
TOP3A-220ENST00000585031 TSHZ1Q6ZSZ6 1077 aa20.92■□□□□ 0.94
TOP3A-220ENST00000585031 RIOX1Q9H6W3 641 aa20.92■□□□□ 0.94
TOP3A-220ENST00000585031 ZNF215Q9UL58 517 aaPredicted RBP20.92■□□□□ 0.94
TOP3A-220ENST00000585031 DMXL1Q9Y485 3027 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 GSTTP1A0A1W2PQM5 241 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 MBLAC1A4D2B0 266 aaPredicted RBP20.91■□□□□ 0.94
TOP3A-220ENST00000585031 ATP9AO75110 1047 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 SDSP20132 328 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 ID4P47928 161 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 GRIK4Q16099 956 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 TAF2Q6P1X5 1199 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 CYB5R4Q7L1T6 521 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 S1PR5Q9H228 398 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 SENP2Q9HC62 589 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 HCSTQ9UBK5 93 aa20.91■□□□□ 0.94
TOP3A-220ENST00000585031 DNAH14Q0VDD8 3507 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 ZNF292O60281 2723 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 FIBPO43427 364 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 MARK3P27448 753 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 TCF7P36402 384 aaPredicted RBP20.9■□□□□ 0.94
TOP3A-220ENST00000585031 ERVFC1P60507 584 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 PPFIA1Q13136 1202 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 GNPTABQ3T906 1256 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 TICAM2Q86XR7 235 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 RILPL2Q969X0 211 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 TLE6Q9H808 572 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 CDH22Q9UJ99 828 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 TUBE1Q9UJT0 475 aa20.9■□□□□ 0.94
TOP3A-220ENST00000585031 MRPS6P82932 125 aaKnown RBP20.89■□□□□ 0.93
TOP3A-220ENST00000585031 KCNC3Q14003 757 aa20.89■□□□□ 0.93
TOP3A-220ENST00000585031 IFIT1BQ5T764 474 aaKnown RBP20.89■□□□□ 0.93
TOP3A-220ENST00000585031 NPAS4Q8IUM7 802 aa20.89■□□□□ 0.93
TOP3A-220ENST00000585031 SENP7Q9BQF6 1050 aa20.89■□□□□ 0.93
TOP3A-220ENST00000585031 TMX1Q9H3N1 280 aa20.89■□□□□ 0.93
TOP3A-220ENST00000585031 PADI3Q9ULW8 664 aa20.89■□□□□ 0.93
TOP3A-220ENST00000585031 SP100P23497 879 aaPredicted RBP20.88■□□□□ 0.93
TOP3A-220ENST00000585031 TMEM62Q0P6H9 643 aa20.88■□□□□ 0.93
TOP3A-220ENST00000585031 APOL5Q9BWW9 433 aa20.88■□□□□ 0.93
TOP3A-220ENST00000585031 FAM49AQ9H0Q0 323 aaPredicted RBP20.88■□□□□ 0.93
TOP3A-220ENST00000585031 STAM2O75886 525 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 ARP10275 920 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 KCNA2P16389 499 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 NT5C2P49902 561 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 IGBP1P78318 339 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 DUSP6Q16828 381 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 SYCE2Q6PIF2 218 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 USP17L6PQ6QN14 398 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 TMEM105Q8N8V8 129 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 SMOC2Q9H3U7 446 aa20.87■□□□□ 0.93
TOP3A-220ENST00000585031 PNMA6FA0A0J9YX94 578 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 MGEA5O60502 916 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 GRM4Q14833 912 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 CWC27Q6UX04 472 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms