RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 FAM160B1Q5W0V3 765 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 KRT25Q7Z3Z0 450 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 WNT8BQ93098 351 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 LENG9Q96B70 501 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 MBOAT7Q96N66 472 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 RIT2Q99578 217 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 SETD4Q9NVD3 440 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 PKD2L1Q9P0L9 805 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 TUBE1Q9UJT0 475 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 TELO2Q9Y4R8 837 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 COL1A2P08123 1366 aa19.02■□□□□ 0.64
CSNK1D-225ENST00000584913 ZBBXA8MT70 800 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 THPOP40225 353 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 NEK4P51957 841 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 GRIK4Q16099 956 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 Q4G0T1 1027 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 MIS18BP1Q6P0N0 1132 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 RSPH3Q86UC2 560 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 RASGRP4Q8TDF6 673 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 APBB2Q92870 758 aa19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 NAP1L4Q99733 375 aaKnown RBP19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 TRIP12Q14669 1992 aaPredicted RBP19.01■□□□□ 0.63
CSNK1D-225ENST00000584913 ADAMTS3O15072 1205 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 SEC24BO95487 1268 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 CCNE2O96020 404 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 KCNJ6P48051 423 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 IKBKEQ14164 716 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 NONOQ15233 471 aaKnown RBP eCLIP19■□□□□ 0.63
CSNK1D-225ENST00000584913 ME3Q16798 604 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 PRR16Q569H4 304 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 RDM1Q8NG50 284 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 TBCKQ8TEA7 893 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 ZNF576Q9H609 170 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 SQORQ9Y6N5 450 aa19■□□□□ 0.63
CSNK1D-225ENST00000584913 COL4A6Q14031 1691 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 HBP1O60381 514 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 CTDNEP1O95476 244 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 GCFC2P16383 781 aaKnown RBP18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 SFNP31947 248 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 RBM25P49756 843 aaKnown RBP18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 WDR5P61964 334 aaKnown RBP18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 MKRN4PQ13434 485 aaPredicted RBP18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 MBTPS1Q14703 1052 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 PLCB4Q15147 1175 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 PLEKHG4Q58EX7 1191 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 MARCH8Q5T0T0 291 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 ATP8B4Q8TF62 1192 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 LARP6Q9BRS8 491 aaKnown RBP18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 TSHZ2Q9NRE2 1034 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 MAFBQ9Y5Q3 323 aaPredicted RBP18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 IGSF9BQ9UPX0 1349 aa18.99■□□□□ 0.63
CSNK1D-225ENST00000584913 WDR64B1ANS9 1081 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 KIF28PB7ZC32 967 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 EDIL3O43854 480 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 PPFIA3O75145 1194 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 PSAPP07602 524 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 INSRRP14616 1297 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 PPP4R3AQ6IN85 833 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 HERC6Q8IVU3 1022 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 SLC5A5Q92911 643 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 FAM167AQ96KS9 214 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 CDX2Q99626 313 aaPredicted RBP18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 SLC28A3Q9HAS3 691 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 ZNF302Q9NR11 478 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 ORC3Q9UBD5 711 aaPredicted RBP18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 PCDHA2Q9Y5H9 948 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 PCDHA10Q9Y5I2 948 aa18.98■□□□□ 0.63
CSNK1D-225ENST00000584913 KAT6AQ92794 2004 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 SMIM35A0A1B0GVV1 85 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 POTEB3A0JP26 581 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 MSH4O15457 936 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 MARK3P27448 753 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 JAK3P52333 1124 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 MGAT3Q09327 533 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 ZNF484Q5JVG2 852 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 POTEBQ6S5H4 581 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 CCDC60Q8IWA6 550 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 NME8Q8N427 588 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 USP38Q8NB14 1042 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 NSUN7Q8NE18 718 aaKnown RBP18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 BBXQ8WY36 941 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 SEPT8Q92599 483 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 AIFM3Q96NN9 605 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 LLPHQ9BRT6 129 aaKnown RBP18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 BRMS1Q9HCU9 246 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 CEP131Q9UPN4 1083 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 LIMCH1Q9UPQ0 1083 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 TRPC6Q9Y210 931 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 KDM3AQ9Y4C1 1321 aa18.97■□□□□ 0.63
CSNK1D-225ENST00000584913 CCDC194A0A1B0GVG4 234 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 GRXCR1A8MXD5 290 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 BACH1O14867 736 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 TBX3O15119 743 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 PBX2P40425 430 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 B3GNT9Q6UX72 402 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 ZNF710Q8N1W2 664 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 TET1Q8NFU7 2136 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 ZSCAN31Q96LW9 406 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 TEKT3Q9BXF9 490 aa18.96■□□□□ 0.63
CSNK1D-225ENST00000584913 SH2B1Q9NRF2 756 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms