RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 FBXO18Q8NFZ0 1043 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 ATP6V0A1Q93050 837 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 C8orf76Q96K31 380 aa18.4■□□□□ 0.54
ERBB2-222ENST00000584908 TET1Q8NFU7 2136 aa18.39■□□□□ 0.54
ERBB2-222ENST00000584908 SZT2Q5T011 3432 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 MBLAC1A4D2B0 266 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-222ENST00000584908 DDX39AO00148 427 aaKnown RBP18.39■□□□□ 0.53
ERBB2-222ENST00000584908 CKBP12277 381 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 LETM2Q2VYF4 491 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 RASIP1Q5U651 963 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 MIS18BP1Q6P0N0 1132 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 PSRC1Q6PGN9 363 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-222ENST00000584908 CCDC60Q8IWA6 550 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-222ENST00000584908 RETREG2Q8NC44 543 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 LMBR1Q8WVP7 490 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 WNT8BQ93098 351 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 SCLYQ96I15 445 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.536e-6■■□□□ 11.7
ERBB2-222ENST00000584908 KCNMB3Q9NPA1 279 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 SETD4Q9NVD3 440 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 DDX25Q9UHL0 483 aaKnown RBP18.39■□□□□ 0.53
ERBB2-222ENST00000584908 PCDHA10Q9Y5I2 948 aa18.39■□□□□ 0.53
ERBB2-222ENST00000584908 MAFBQ9Y5Q3 323 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-222ENST00000584908 FAM205CA6NFA0 338 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 TBX3O15119 743 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 TREHO43280 583 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 SLC37A4O43826 429 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 GAS7O60861 476 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 CAND2O75155 1236 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 PARNO95453 639 aaKnown RBP18.38■□□□□ 0.53
ERBB2-222ENST00000584908 PFKMP08237 780 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 SELPP16109 830 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 PLCB4Q15147 1175 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 LRCH2Q5VUJ6 765 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 FAM160B1Q5W0V3 765 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 TRAF7Q6Q0C0 670 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 RPUSD2Q8IZ73 545 aaKnown RBP18.38■□□□□ 0.53
ERBB2-222ENST00000584908 TNPO1Q92973 898 aaKnown RBP18.38■□□□□ 0.53
ERBB2-222ENST00000584908 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
ERBB2-222ENST00000584908 WDR64B1ANS9 1081 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 PSAPP07602 524 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 MARK3P27448 753 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 SFNP31947 248 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 PPFIA1Q13136 1202 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
ERBB2-222ENST00000584908 GRIK4Q16099 956 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 MARCH8Q5T0T0 291 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 RPAINQ86UA6 219 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 RDM1Q8NG50 284 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 TEKT3Q9BXF9 490 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 FOXP1Q9H334 677 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-222ENST00000584908 ZNF302Q9NR11 478 aa18.37■□□□□ 0.53
ERBB2-222ENST00000584908 IGSF9BQ9UPX0 1349 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 SOX1O00570 391 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-222ENST00000584908 CCNT1O60563 726 aaKnown RBP18.36■□□□□ 0.53
ERBB2-222ENST00000584908 ACRP10323 421 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 INSRRP14616 1297 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 JAK3P52333 1124 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 FOSBP53539 338 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 GPNMBQ14956 572 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 SWSAP1Q6NVH7 229 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 ZNF365Q70YC5 407 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 LRRC8DQ7L1W4 858 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 ATP8B4Q8TF62 1192 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 HERVK_113Q902F9 699 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 UNC45AQ9H3U1 944 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 DISC1Q9NRI5 854 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 KIF3AQ9Y496 699 aa18.36■□□□□ 0.53
ERBB2-222ENST00000584908 SIP14410 1827 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 POTEB3A0JP26 581 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 BACH1O14867 736 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 FGBP02675 491 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 CXCL10P02778 98 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 ATP4AP20648 1035 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 GUCY1B3Q02153 619 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 ZNF618Q5T7W0 954 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 TAF2Q6P1X5 1199 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 PDXDC2PQ6P474 469 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 POTEBQ6S5H4 581 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 HAS1Q92839 578 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 GJA10Q969M2 543 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 RNPC3Q96LT9 517 aaKnown RBP18.35■□□□□ 0.53
ERBB2-222ENST00000584908 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 COL1A2P08123 1366 aa18.35■□□□□ 0.53
ERBB2-222ENST00000584908 HBP1O60381 514 aa18.34■□□□□ 0.53
ERBB2-222ENST00000584908 RPLP2P05387 115 aaKnown RBP18.34■□□□□ 0.53
ERBB2-222ENST00000584908 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■□□□□ 10.6
ERBB2-222ENST00000584908 PPP2R5CQ13362 524 aa18.34■□□□□ 0.53
ERBB2-222ENST00000584908 CUL4AQ13619 759 aa18.34■□□□□ 0.53
ERBB2-222ENST00000584908 VAV3Q9UKW4 847 aa18.34■□□□□ 0.53
ERBB2-222ENST00000584908 TRPC6Q9Y210 931 aa18.34■□□□□ 0.53
ERBB2-222ENST00000584908 EVPLQ92817 2033 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 WNT7AO00755 349 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 NBNO60934 754 aa18.33■□□□□ 0.53
ERBB2-222ENST00000584908 THPOP40225 353 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms