RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 JAZF1Q86VZ6 243 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 WDR75Q8IWA0 830 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 IFNL2Q8IZJ0 200 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 NLGN2Q8NFZ4 835 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 KANSL2Q9H9L4 492 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 FANCLQ9NW38 375 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 ACTR10Q9NZ32 417 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 ARHGEF10O15013 1369 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNF205O95201 554 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 KCNAB2Q13303 367 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 AUHQ13825 339 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 CCDC81Q6ZN84 652 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 FERMT3Q86UX7 667 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 ATL2Q8NHH9 583 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNF296Q8WUU4 475 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 HNRNPLLQ8WVV9 542 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 MCOLN1Q9GZU1 580 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 COPRSQ9NQ92 184 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 SUCOQ9UBS9 1254 aaKnown RBP2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNF536O15090 1300 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 NSD2O96028 1365 aa2.46□□□□□ -2.02
SMCHD1-211ENST00000584897 KRTAP9-6A0A140TA67 174 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 KRIT1O00522 736 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 NME1P15531 152 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 GDF5P43026 501 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 SLC7A5Q01650 507 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 GK5Q6ZS86 529 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 TMC6Q7Z403 805 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 EPN3Q9H201 632 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 ADAMTS6Q9UKP5 1117 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 PRKAB1Q9Y478 270 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 TIAM2Q8IVF5 1701 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 OVOS2A0A0G2JMS6 1433 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 OVOS2A0A0J9YW53 1432 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 OVOS2Q6IE36 1432 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 SLC22A31A6NKX4 558 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 F13A1P00488 732 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 CT47B1P0C2W7 299 aaPredicted RBP2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 PRKCAP17252 672 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 HOXA5P20719 270 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 RPL11P62913 178 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 FXNQ16595 210 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 SEC14L1Q92503 715 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 TSPAN17Q96FV3 270 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 CLIC6Q96NY7 704 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 CDC6Q99741 560 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 FBRSQ9HAH7 460 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 PRDM7Q9NQW5 492 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 GINM1Q9NU53 330 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 ADAMTS1Q9UHI8 967 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 WASHC2AQ641Q2 1341 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM208AQ9UK61 1670 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 SBF1O95248 1867 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 CFAP65Q6ZU64 1925 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM221AA4D161 298 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 CHURC1-FNTBB4DL54 471 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 PAGE1O75459 146 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 BRD3Q15059 726 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM26FQ5R3K3 315 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 RCSD1Q6JBY9 416 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 MPHOSPH9Q99550 1183 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 IFT57Q9NWB7 429 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 PFDN2Q9UHV9 154 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 DLEC1Q9Y238 1755 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 BTAF1O14981 1849 aa2.45□□□□□ -2.02
SMCHD1-211ENST00000584897 MEIS3P2A8K0S8 358 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 UPK3BL1B0FP48 263 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 UPK3BL2E5RIL1 263 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 F8W031 263 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SMAD7O15105 426 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 CYP2C8P10632 490 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 NKX3-2P78367 333 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SLITRK4Q8IW52 837 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 PHOSPHO1Q8TCT1 267 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 CPA5Q8WXQ8 436 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 BARX1Q9HBU1 254 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 KDM6AO15550 1401 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SPATA31A1Q5TZJ5 1347 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 BUB1BO60566 1050 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 FKTNO75072 461 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 VAV1P15498 845 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 GNPTABQ3T906 1256 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 HSF5Q4G112 596 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 LDHDQ86WU2 507 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 LINC01356Q8N9X3 169 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 PWWP2AQ96N64 755 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 TMEM209Q96SK2 561 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNF408Q9H9D4 720 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 BRMS1Q9HCU9 246 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 PRKAG3Q9UGI9 489 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 THRAP3Q9Y2W1 955 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SSH2Q76I76 1423 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 RAB3GAP2Q9H2M9 1393 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 TTC21AQ8NDW8 1320 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 GSTA4O15217 222 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SSRP1Q08945 709 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 GPR162Q16538 588 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 ZXDCQ2QGD7 858 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 MROH9Q5TGP6 573 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 E4F1Q66K89 784 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms