RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 UPF3AQ9H1J1 476 aaKnown RBP13.9□□□□□ -0.18
CDK5R1-202ENST00000584716 AZI2Q9H6S1 392 aa13.9□□□□□ -0.18
CDK5R1-202ENST00000584716 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
CDK5R1-202ENST00000584716 ZNF302Q9NR11 478 aa13.9□□□□□ -0.18
CDK5R1-202ENST00000584716 MYH9P35579 1960 aaKnown RBP13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 ADAMTS4O75173 837 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 PPFIA4O75335 1185 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 SLITRK3O94933 977 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 MARK3P27448 753 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 STAT5BP51692 787 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 KARSQ15046 597 aaKnown RBP13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 LRRC41Q15345 812 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 KCNA10Q16322 511 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 ECM1Q16610 540 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 UGCGQ16739 394 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 RNF180Q86T96 592 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 CATSPER3Q86XQ3 398 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 TRIM50Q86XT4 487 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 CKAP2LQ8IYA6 745 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 CDK5RAP3Q96JB5 506 aa13.89□□□□□ -0.19
CDK5R1-202ENST00000584716 POTEB3A0JP26 581 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 GOLGA6L22H0YM25 854 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 ZEB2O60315 1214 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 LGALS2P05162 132 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 SPATA31C1P0DKV0 1188 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 TXLNAP40222 546 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 QARSP47897 775 aaKnown RBP13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 PSMC5P62195 406 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 FAM160B1Q5W0V3 765 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 RESP18Q5W5W9 173 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 HAUS3Q68CZ6 603 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 POTEBQ6S5H4 581 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 PDILTQ8N807 584 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 FSIP1Q8NA03 581 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 ARRDC4Q8NCT1 418 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 KLHDC9Q8NEP7 349 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 RDM1Q8NG50 284 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 U2AF1L4Q8WU68 220 aaKnown RBP13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 PPP1R13LQ8WUF5 828 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 LXNQ9BS40 222 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 POLR3CQ9BUI4 534 aaPredicted RBP13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 TMEM106CQ9BVX2 250 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 SMARCAD1Q9H4L7 1026 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 WRAP73Q9P2S5 460 aaPredicted RBP13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 CCDC39Q9UFE4 941 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
CDK5R1-202ENST00000584716 HTTP42858 3142 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 IGKV6D-21A0A0A0MT36 114 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 DDX11L8A8MPP1 907 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 ZBTB39O15060 712 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 LGR5O75473 907 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 SGPL1O95470 568 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 ASGR1P07306 291 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 CMA1P23946 247 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 RPA1P27694 616 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 GRB10Q13322 594 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 CXCL17Q6UXB2 119 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 PCSK9Q8NBP7 692 aaKnown RBP13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 C16orf70Q9BSU1 422 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 GOLPH3LQ9H4A5 285 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 LMBRD1Q9NUN5 540 aa13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 DDX19AQ9NUU7 478 aaKnown RBP13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 MAFBQ9Y5Q3 323 aaPredicted RBP13.87□□□□□ -0.19
CDK5R1-202ENST00000584716 CENPFP49454 3210 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 A0A1W2PQ27 194 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 A0A1W2PQ64 194 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 A0A1W2PQD8 194 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 TMEM150BA6NC51 233 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 E9PMD0 336 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 H3BRB1 525 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 GJB1P08034 283 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 PFKFB1P16118 471 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 ATP4AP20648 1035 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 MCM4P33991 863 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 NDUFA8P51970 172 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 PSMC6P62333 389 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 PURAQ00577 322 aaKnown RBP13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 RRAGBQ5VZM2 374 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 CCSAPQ6IQ19 270 aaPredicted RBP13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 NEK9Q8TD19 979 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 AFAP1L1Q8TED9 768 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 PIGOQ8TEQ8 1089 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 ATP6V0A1Q93050 837 aa13.86□□□□□ -0.19
CDK5R1-202ENST00000584716 SH2D3AQ9BRG2 576 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms