RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RNF180Q86T96 592 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 CABP7Q86V35 215 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 AFAP1L1Q8TED9 768 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
CDRT1-207ENST00000583965 ATP6V0A1Q93050 837 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 HSD17B14Q9BPX1 270 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 MCOLN1Q9GZU1 580 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 NT5C3AQ9H0P0 336 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
CDRT1-207ENST00000583965 BACH1O14867 736 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 CTAGE5O15320 804 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 PGK1P00558 417 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 PTGS1P23219 599 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 CCT6AP40227 531 aaKnown RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 SLC26A2P50443 739 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 PSMC5P62195 406 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 UBE2HP62256 183 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 GNASQ5JWF2 1037 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 SHC4Q6S5L8 630 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 PLPPR4Q7Z2D5 763 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 PCSK9Q8NBP7 692 aaKnown RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 ARRDC4Q8NCT1 418 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 KLHDC9Q8NEP7 349 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 MRPS27Q92552 414 aaKnown RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 CALML4Q96GE6 196 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 EPSTI1Q96J88 318 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 TSEN34Q9BSV6 310 aaKnown RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 ZNF302Q9NR11 478 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 CCDC39Q9UFE4 941 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 MAFBQ9Y5Q3 323 aaPredicted RBP13.07□□□□□ -0.32
CDRT1-207ENST00000583965 IGSF9BQ9UPX0 1349 aa13.07□□□□□ -0.32
CDRT1-207ENST00000583965 BRCA2P51587 3418 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 PP2D1A8MPX8 630 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
CDRT1-207ENST00000583965 SLITRK3O94933 977 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 LYPLA2O95372 231 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 LGALS2P05162 132 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 GJB1P08034 283 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 SPATA31C1P0DKV0 1188 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 CDC25AP30304 524 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 STAT5BP51692 787 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 LRRC41Q15345 812 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 CATSPER3Q86XQ3 398 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
CDRT1-207ENST00000583965 C4orf19Q8IY42 314 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 CDK5RAP3Q96JB5 506 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 DEFB118Q96PH6 123 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 LXNQ9BS40 222 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 RGL1Q9NZL6 768 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 GABBR1Q9UBS5 961 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 ZNF215Q9UL58 517 aaPredicted RBP13.06□□□□□ -0.32
CDRT1-207ENST00000583965 OGDHLQ9ULD0 1010 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 TELO2Q9Y4R8 837 aa13.06□□□□□ -0.32
CDRT1-207ENST00000583965 MOXD2PA6NHM9 499 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 MED24O75448 989 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 XRCC6P12956 609 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDRT1-207ENST00000583965 BEX3Q00994 111 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 CYP4A11Q02928 519 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
CDRT1-207ENST00000583965 CCSAPQ6IQ19 270 aaPredicted RBP13.05□□□□□ -0.32
CDRT1-207ENST00000583965 PDXDC2PQ6P474 469 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 USP49Q70CQ1 688 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 TPH2Q8IWU9 490 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 BANK1Q8NDB2 785 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 RASSF8Q8NHQ8 419 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 GLG1Q92896 1179 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 FAM167AQ96KS9 214 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 PCYT2Q99447 389 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 C16orf70Q9BSU1 422 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 KATNAL1Q9BW62 490 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 CRISPLD2Q9H0B8 497 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 LMBRD1Q9NUN5 540 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 ERAP1Q9NZ08 941 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 HPSEQ9Y251 543 aa13.05□□□□□ -0.32
CDRT1-207ENST00000583965 POTEB3A0JP26 581 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 MYADML2A6NDP7 307 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 KBTBD13C9JR72 458 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 H3BRB1 525 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 CABYRO75952 493 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 SGPL1O95470 568 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 F2P00734 622 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
CDRT1-207ENST00000583965 MYL3P08590 195 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 PFKFB1P16118 471 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 PURAQ00577 322 aaKnown RBP13.04□□□□□ -0.32
CDRT1-207ENST00000583965 GRB10Q13322 594 aa13.04□□□□□ -0.32
CDRT1-207ENST00000583965 CTTNQ14247 550 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms