RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 LONP1P36776 959 aaKnown RBP12.29□□□□□ -0.44
TOP3A-216ENST00000583804 CHMP4BP1P59074 171 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 LRRC41Q15345 812 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 EPHA7Q15375 998 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 KCNA10Q16322 511 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 B3GNT9Q6UX72 402 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 ABHD15Q6UXT9 468 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 IGSF22Q8N9C0 903 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 PCSK9Q8NBP7 692 aaKnown RBP12.29□□□□□ -0.44
TOP3A-216ENST00000583804 KLHDC9Q8NEP7 349 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 RDM1Q8NG50 284 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 MRPS27Q92552 414 aaKnown RBP12.29□□□□□ -0.44
TOP3A-216ENST00000583804 GLG1Q92896 1179 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 PLIN2Q99541 437 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 AZI2Q9H6S1 392 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 GABBR1Q9UBS5 961 aa12.29□□□□□ -0.44
TOP3A-216ENST00000583804 DOCK5Q9H7D0 1870 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 HTTP42858 3142 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 NR1I2O75469 434 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 ATG7O95352 703 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 ZNF286BP0CG31 522 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 UBA7P41226 1012 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 NDUFA8P51970 172 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 CYP4A11Q02928 519 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 FAM160B1Q5W0V3 765 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 KRT79Q5XKE5 535 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 PDXDC2PQ6P474 469 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 CXCL17Q6UXB2 119 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 TPH2Q8IWU9 490 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 PDILTQ8N807 584 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 BANK1Q8NDB2 785 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 SYMPKQ92797 1274 aaKnown RBP12.28□□□□□ -0.44
TOP3A-216ENST00000583804 DYDC2Q96IM9 177 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 AK8Q96MA6 479 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 EIF2AK1Q9BQI3 630 aaKnown RBP12.28□□□□□ -0.44
TOP3A-216ENST00000583804 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 RGL1Q9NZL6 768 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 OGDHLQ9ULD0 1010 aa12.28□□□□□ -0.44
TOP3A-216ENST00000583804 MORC2Q9Y6X9 1032 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-216ENST00000583804 KBTBD13C9JR72 458 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 KPNA6O60684 536 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 LGALS2P05162 132 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 P4HBP07237 508 aaKnown RBP12.27□□□□□ -0.44
TOP3A-216ENST00000583804 ASGR1P07306 291 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 CCT6AP40227 531 aaKnown RBP12.27□□□□□ -0.44
TOP3A-216ENST00000583804 GJA8P48165 433 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 STAT5BP51692 787 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 NKX3-2P78367 333 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 CTTNQ14247 550 aaKnown RBP12.27□□□□□ -0.44
TOP3A-216ENST00000583804 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.44
TOP3A-216ENST00000583804 ADALQ6DHV7 355 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 TRMT1LQ7Z2T5 733 aaKnown RBP12.27□□□□□ -0.44
TOP3A-216ENST00000583804 TRIM50Q86XT4 487 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 CCDC60Q8IWA6 550 aaPredicted RBP12.27□□□□□ -0.44
TOP3A-216ENST00000583804 CKAP2LQ8IYA6 745 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 SNX29Q8TEQ0 813 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 VTI1AQ96AJ9 217 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 DACT1Q9NYF0 836 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 STK24Q9Y6E0 443 aa12.27□□□□□ -0.44
TOP3A-216ENST00000583804 IGKV6D-21A0A0A0MT36 114 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 H3BRB1 525 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 LGR5O75473 907 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 SLITRK3O94933 977 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 MBD3O95983 291 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-216ENST00000583804 MARK3P27448 753 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 CST5P28325 142 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-216ENST00000583804 TXLNAP40222 546 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 QARSP47897 775 aaKnown RBP12.27□□□□□ -0.45
TOP3A-216ENST00000583804 ACLYP53396 1101 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 PSMC5P62195 406 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 CAMK4Q16566 473 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 RESP18Q5W5W9 173 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 HAUS3Q68CZ6 603 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 CABP7Q86V35 215 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
TOP3A-216ENST00000583804 ATP6V0A1Q93050 837 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 CDK5RAP3Q96JB5 506 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 PCYT2Q99447 389 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 HSD17B14Q9BPX1 270 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 C16orf70Q9BSU1 422 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 MTG1Q9BT17 334 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-216ENST00000583804 CRISPLD2Q9H0B8 497 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 TUT1Q9H6E5 874 aaKnown RBP12.27□□□□□ -0.45
TOP3A-216ENST00000583804 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
TOP3A-216ENST00000583804 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-216ENST00000583804 CENPFP49454 3210 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 EMSYQ7Z589 1322 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 A0A1W2PQ27 194 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 A0A1W2PQ64 194 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 A0A1W2PQD8 194 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 DNM1LO00429 736 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 DKC1O60832 514 aaKnown RBP eCLIP12.26□□□□□ -0.45
TOP3A-216ENST00000583804 MED24O75448 989 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 RPA1P27694 616 aa12.26□□□□□ -0.45
TOP3A-216ENST00000583804 PURAQ00577 322 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms