RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ANAPC15P60006 121 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 DLX2Q07687 328 aaPredicted RBP23.47■■□□□ 1.35
SRSF1-206ENST00000583741 CTC1Q2NKJ3 1217 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 RNF20Q5VTR2 975 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 POTEBQ6S5H4 581 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 CLP1Q92989 425 aaKnown RBP23.47■■□□□ 1.35
SRSF1-206ENST00000583741 LY9Q9HBG7 655 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 TUBE1Q9UJT0 475 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 C19orf67A6NJJ6 358 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 ENPP3O14638 875 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 RB1P06400 928 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 HYAL1Q12794 435 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 CLUL1Q15846 466 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 GRIK4Q16099 956 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 FBXO47Q5MNV8 452 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 MARCH8Q5T0T0 291 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 CREB3L3Q68CJ9 461 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 ADHFE1Q8IWW8 467 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 GIMAP8Q8ND71 665 aaPredicted RBP23.46■■□□□ 1.35
SRSF1-206ENST00000583741 CTCFLQ8NI51 663 aaPredicted RBP23.46■■□□□ 1.35
SRSF1-206ENST00000583741 DNAJB3Q8WWF6 145 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 GPRASP2Q96D09 838 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 ZBTB10Q96DT7 871 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 MAP3K14Q99558 947 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 PRKAG3Q9UGI9 489 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 FAM50BQ9Y247 325 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 ZNF318Q5VUA4 2279 aa23.46■■□□□ 1.35
SRSF1-206ENST00000583741 MBLAC1A4D2B0 266 aaPredicted RBP23.45■■□□□ 1.34
SRSF1-206ENST00000583741 DDAH1O94760 285 aa23.45■■□□□ 1.34
SRSF1-206ENST00000583741 PLEKHA8P1O95397 391 aa23.45■■□□□ 1.34
SRSF1-206ENST00000583741 GTF2F1P35269 517 aaKnown RBP eCLIP23.45■■□□□ 1.342e-7■■■□□ 15.1
SRSF1-206ENST00000583741 ANP32AP39687 249 aaKnown RBP23.45■■□□□ 1.34
SRSF1-206ENST00000583741 LINC01599Q8WXQ3 324 aa23.45■■□□□ 1.34
SRSF1-206ENST00000583741 ZNF689Q96CS4 500 aaPredicted RBP23.45■■□□□ 1.34
SRSF1-206ENST00000583741 KIF2CQ99661 725 aa23.45■■□□□ 1.34
SRSF1-206ENST00000583741 LMAN2LQ9H0V9 348 aa23.45■■□□□ 1.34
SRSF1-206ENST00000583741 PKD2L1Q9P0L9 805 aa23.45■■□□□ 1.34
SRSF1-206ENST00000583741 SEC63Q9UGP8 760 aaKnown RBP23.45■■□□□ 1.34
SRSF1-206ENST00000583741 SLC27A2O14975 620 aa23.44■■□□□ 1.34
SRSF1-206ENST00000583741 CSPG5O95196 566 aa23.44■■□□□ 1.34
SRSF1-206ENST00000583741 CSPP1Q1MSJ5 1256 aa23.44■■□□□ 1.34
SRSF1-206ENST00000583741 CMTR1Q8N1G2 835 aaKnown RBP23.44■■□□□ 1.34
SRSF1-206ENST00000583741 SRBD1Q8N5C6 995 aaKnown RBP23.44■■□□□ 1.34
SRSF1-206ENST00000583741 SEPT1Q8WYJ6 367 aa23.44■■□□□ 1.34
SRSF1-206ENST00000583741 AGO3Q9H9G7 860 aaKnown RBP23.44■■□□□ 1.34
SRSF1-206ENST00000583741 ERAP1Q9NZ08 941 aa23.44■■□□□ 1.34
SRSF1-206ENST00000583741 RWDD3Q9Y3V2 267 aa23.44■■□□□ 1.34
SRSF1-206ENST00000583741 CDY2AQ9Y6F7 541 aa23.44■■□□□ 1.34
SRSF1-206ENST00000583741 KIF5BP33176 963 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 IRS1P35568 1242 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 COL9A3Q14050 684 aaPredicted RBP23.43■■□□□ 1.34
SRSF1-206ENST00000583741 BTG3Q14201 252 aaPredicted RBP23.43■■□□□ 1.34
SRSF1-206ENST00000583741 RSPH3Q86UC2 560 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 GLG1Q92896 1179 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 KCNB2Q92953 911 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 SNX14Q9Y5W7 946 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 NCK2O43639 380 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 TBX10O75333 385 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 DGKIO75912 1065 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 SMARCA1P28370 1054 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 CAMK1Q14012 370 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 SMAD2Q15796 467 aaKnown RBP23.43■■□□□ 1.34
SRSF1-206ENST00000583741 UBE2SQ16763 222 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 TSHZ1Q6ZSZ6 1077 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 RASEFQ8IZ41 740 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 CDHR1Q96JP9 859 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 PSTPIP2Q9H939 334 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 ALG13Q9NP73 1137 aaKnown RBP23.43■■□□□ 1.34
SRSF1-206ENST00000583741 UBIAD1Q9Y5Z9 338 aa23.43■■□□□ 1.34
SRSF1-206ENST00000583741 LINC01565O15544 149 aa23.42■■□□□ 1.34
SRSF1-206ENST00000583741 MMP1P03956 469 aa23.42■■□□□ 1.34
SRSF1-206ENST00000583741 RXRAP19793 462 aa23.42■■□□□ 1.34
SRSF1-206ENST00000583741 CD52P31358 61 aa23.42■■□□□ 1.34
SRSF1-206ENST00000583741 IGBP1P78318 339 aa23.42■■□□□ 1.34
SRSF1-206ENST00000583741 MRPS6P82932 125 aaKnown RBP23.42■■□□□ 1.34
SRSF1-206ENST00000583741 MTMR1Q13613 665 aa23.42■■□□□ 1.34
SRSF1-206ENST00000583741 ALYREFQ86V81 257 aaKnown RBP23.42■■□□□ 1.34
SRSF1-206ENST00000583741 hCG_1642624A0A1W2PR95 340 aa23.41■■□□□ 1.34
SRSF1-206ENST00000583741 MBTPS2O43462 519 aa23.41■■□□□ 1.34
SRSF1-206ENST00000583741 RTN4RL1Q86UN2 441 aaPredicted RBP23.41■■□□□ 1.34
SRSF1-206ENST00000583741 CRIPAKQ8N1N5 446 aa23.41■■□□□ 1.34
SRSF1-206ENST00000583741 PCYT2Q99447 389 aa23.41■■□□□ 1.34
SRSF1-206ENST00000583741 LZTS2Q9BRK4 669 aa23.41■■□□□ 1.34
SRSF1-206ENST00000583741 FAM49AQ9H0Q0 323 aaPredicted RBP23.41■■□□□ 1.34
SRSF1-206ENST00000583741 SMARCAD1Q9H4L7 1026 aa23.41■■□□□ 1.34
SRSF1-206ENST00000583741 IGFLR1Q9H665 355 aa23.41■■□□□ 1.34
SRSF1-206ENST00000583741 MRPL42Q9Y6G3 142 aaKnown RBP23.41■■□□□ 1.34
SRSF1-206ENST00000583741 PRC1O43663 620 aa23.4■■□□□ 1.34
SRSF1-206ENST00000583741 PLVAPQ9BX97 442 aa23.4■■□□□ 1.34
SRSF1-206ENST00000583741 PLAGL2Q9UPG8 496 aa23.4■■□□□ 1.34
SRSF1-206ENST00000583741 SH2B2O14492 632 aaPredicted RBP23.39■■□□□ 1.34
SRSF1-206ENST00000583741 INSRRP14616 1297 aa23.39■■□□□ 1.34
SRSF1-206ENST00000583741 DNAJB1P25685 340 aa23.39■■□□□ 1.34
SRSF1-206ENST00000583741 RABEP1Q15276 862 aa23.39■■□□□ 1.34
SRSF1-206ENST00000583741 TSGA10IPQ3SY00 556 aa23.39■■□□□ 1.34
SRSF1-206ENST00000583741 RAB11FIP4Q86YS3 637 aa23.39■■□□□ 1.34
SRSF1-206ENST00000583741 TECTAO75443 2155 aa23.39■■□□□ 1.33
SRSF1-206ENST00000583741 PLXNA4Q9HCM2 1894 aa23.39■■□□□ 1.33
SRSF1-206ENST00000583741 GNAQP50148 359 aa23.38■■□□□ 1.33
SRSF1-206ENST00000583741 TMEM62Q0P6H9 643 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms