RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 GFRA3O60609 400 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 STAG3L1P0CL83 205 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 MARK3P27448 753 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 CD52P31358 61 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 TCF7P36402 384 aaPredicted RBP14.18□□□□□ -0.14
TOP3A-215ENST00000583328 SIGLEC14Q08ET2 396 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 GRIK4Q16099 956 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 SLC35G1Q2M3R5 365 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 NPAS4Q8IUM7 802 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 GIMAP8Q8ND71 665 aaPredicted RBP14.18□□□□□ -0.14
TOP3A-215ENST00000583328 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 MICAL1Q8TDZ2 1067 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 PIBF1Q8WXW3 757 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 IRF2BPLQ9H1B7 796 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 AGO3Q9H9G7 860 aaKnown RBP14.18□□□□□ -0.14
TOP3A-215ENST00000583328 TUBE1Q9UJT0 475 aa14.18□□□□□ -0.14
TOP3A-215ENST00000583328 FRMPD4Q14CM0 1322 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 CYTH3O43739 400 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 PPFIA3O75145 1194 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 NEFLP07196 543 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 IGBP1P78318 339 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 GRM4Q14833 912 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 XRRA1Q6P2D8 792 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 CYB5R4Q7L1T6 521 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 RTN4RL1Q86UN2 441 aaPredicted RBP14.17□□□□□ -0.14
TOP3A-215ENST00000583328 LINC01599Q8WXQ3 324 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 SEPT1Q8WYJ6 367 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 ATOH1Q92858 354 aaPredicted RBP14.17□□□□□ -0.14
TOP3A-215ENST00000583328 GLG1Q92896 1179 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 CUL5Q93034 780 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 FTHL17Q9BXU8 183 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 FAM49AQ9H0Q0 323 aaPredicted RBP14.17□□□□□ -0.14
TOP3A-215ENST00000583328 TLE6Q9H808 572 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 ERAP1Q9NZ08 941 aa14.17□□□□□ -0.14
TOP3A-215ENST00000583328 MBLAC1A4D2B0 266 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-215ENST00000583328 HIP1O00291 1037 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 PER2O15055 1255 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 GLP2RO95838 553 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 IBSPP21815 317 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-215ENST00000583328 AVPR2P30518 371 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 MRPS6P82932 125 aaKnown RBP14.16□□□□□ -0.14
TOP3A-215ENST00000583328 TRDNQ13061 729 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 HDAC1Q13547 482 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-215ENST00000583328 SPOUT1Q5T280 376 aaKnown RBP14.16□□□□□ -0.14
TOP3A-215ENST00000583328 IER5Q5VY09 327 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 PCNX4Q63HM2 1172 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 LRFN2Q9ULH4 789 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 PCDHGC5Q9Y5F6 944 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 RALGAPA2Q2PPJ7 1873 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 NLRC5Q86WI3 1866 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 ZDBF2Q9HCK1 2354 aa14.16□□□□□ -0.14
TOP3A-215ENST00000583328 GSTTP1A0A1W2PQM5 241 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 ERICH2A1L162 156 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 RRN3P2A6NIE6 340 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 M0QZ92 97 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 IFIT3O14879 490 aaKnown RBP14.15□□□□□ -0.14
TOP3A-215ENST00000583328 RPLP2P05387 115 aaKnown RBP14.15□□□□□ -0.14
TOP3A-215ENST00000583328 VCPP55072 806 aaKnown RBP14.15□□□□□ -0.14
TOP3A-215ENST00000583328 MARCH8Q5T0T0 291 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 USP17L6PQ6QN14 398 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 CDHR1Q96JP9 859 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 SMARCAD1Q9H4L7 1026 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 TRPV2Q9Y5S1 764 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 SQORQ9Y6N5 450 aa14.15□□□□□ -0.14
TOP3A-215ENST00000583328 ATP9AO75110 1047 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 SCG2P13521 617 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 ATF7P17544 494 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-215ENST00000583328 GATMP50440 423 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 PAK2Q13177 524 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 B4GALNT3Q6L9W6 998 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 ZBTB33Q86T24 672 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 CRIPAKQ8N1N5 446 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 GPRASP2Q96D09 838 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 ZBTB10Q96DT7 871 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 ASIC4Q96FT7 647 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 NEK1Q96PY6 1258 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 PADI3Q9ULW8 664 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 PCDHB12Q9Y5F1 795 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 WDFY4Q6ZS81 3184 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 TTC3P53804 2025 aa14.14□□□□□ -0.15
TOP3A-215ENST00000583328 MYH6P13533 1939 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 H0Y858 1186 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 INSRRP14616 1297 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 KCNA2P16389 499 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 UBE3AQ05086 875 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 TMEM62Q0P6H9 643 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 WTAPQ15007 396 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 PLEKHM2Q8IWE5 1019 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 ATP8B4Q8TF62 1192 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 SUSD6Q92537 303 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 TNPO1Q92973 898 aaKnown RBP14.13□□□□□ -0.15
TOP3A-215ENST00000583328 CDCA3Q99618 268 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-215ENST00000583328 TLR9Q9NR96 1032 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 AAASQ9NRG9 546 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 PCDHB7Q9Y5E2 793 aa14.13□□□□□ -0.15
TOP3A-215ENST00000583328 PTPRZ1P23471 2315 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-215ENST00000583328 FSD2A1L4K1 749 aa14.12□□□□□ -0.15
TOP3A-215ENST00000583328 MEIS2O14770 477 aa14.12□□□□□ -0.15
TOP3A-215ENST00000583328 RBM10P98175 930 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms